Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 8.9e-41 169.9 87 100.0
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 6.4e-39 163.7 87 98.9
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 2.4e-38 161.8 87 97.7
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 5.4e-38 160.6 87 96.6
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 7.0e-38 160.2 87 96.6
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.9e-35 152.1 87 90.8
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 3.6e-34 147.9 87 87.4
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 1.8e-33 145.6 87 85.1
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 5.2e-33 144.1 87 85.1
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 5.2e-33 144.1 87 86.2
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 1.2e-32 142.9 88 86.4
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 1.1e-30 136.3 87 80.5
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 4.1e-30 134.4 83 83.1
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.6e-29 132.5 87 79.3
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 4.6e-29 131.0 83 80.7
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.5e-27 125.2 87 75.9
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.1e-25 119.8 85 75.3
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 8.3e-23 110.2 87 64.4
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 3.2e-22 108.2 87 64.4
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 7.1e-22 107.1 87 65.5
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 1.6e-21 105.9 87 63.2
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.1e-21 105.5 87 63.2
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 64.4
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 3.5e-21 104.8 87 62.1
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 6.0e-21 104.0 87 62.1
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 7.8e-21 103.6 87 60.9
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 7.8e-21 103.6 87 60.9
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 7.8e-21 103.6 87 60.9
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 7.8e-21 103.6 87 60.9
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 7.8e-21 103.6 87 60.9
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 7.8e-21 103.6 87 62.1
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 1.0e-20 103.2 87 63.2
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.0e-20 103.2 87 58.6
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 3.0e-20 101.7 87 62.1
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 3.9e-20 101.3 87 59.8
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 5.1e-20 100.9 87 63.2
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-19 99.8 87 60.9
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-19 99.8 87 60.9
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 58.6
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.9e-19 99.0 87 60.9
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.3e-19 98.2 87 59.8
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 3.3e-19 98.2 81 63.0
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 4.3e-19 97.8 87 59.8
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 5.6e-19 97.4 87 60.9
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 7.3e-19 97.1 91 59.3
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 7.3e-19 97.1 87 59.8
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 1.2e-18 96.3 87 60.9
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 2.1e-18 95.5 85 57.6
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 2.8e-18 95.1 87 57.5
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 2.8e-18 95.1 86 58.1
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 2.8e-18 95.1 87 57.5
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 3.6e-18 94.7 87 52.9
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 3.6e-18 94.7 87 56.3
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 6.2e-18 94.0 87 57.5
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 8.1e-18 93.6 87 51.7
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 8.1e-18 93.6 87 56.3
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 1.1e-17 93.2 87 59.8
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.1e-17 93.2 87 56.3
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.1e-17 93.2 87 55.2
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 1.1e-17 93.2 87 60.9
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 2.4e-17 92.0 85 57.6
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.4e-17 92.0 87 57.5
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 2.4e-17 92.0 87 59.8
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 4.0e-17 91.3 87 56.3
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 4.0e-17 91.3 87 56.3
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 5.2e-17 90.9 85 57.6
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 6.8e-17 90.5 87 58.6
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 3.4e-16 88.2 87 56.3
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 3.4e-16 88.2 83 57.8
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 5.8e-16 87.4 84 56.0
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 7.6e-16 87.0 87 52.9
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 9.9e-16 86.7 87 54.0
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.9e-15 85.1 87 49.4
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 8.4e-15 83.6 87 51.7
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 1.1e-14 83.2 87 49.4
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.1e-14 83.2 87 49.4
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 1.1e-14 83.2 88 52.3
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 1.1e-14 83.2 87 51.7
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 2.4e-14 82.0 87 49.4
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 4.2e-14 81.3 76 56.6
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 9.2e-14 80.1 87 55.2
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.2e-13 79.7 80 50.0
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.2e-13 79.7 86 44.2
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 1.2e-13 79.7 87 48.3
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 1.6e-13 79.3 82 56.1
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 2.1e-13 79.0 45 82.2
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 2.1e-13 79.0 86 51.2
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 4.6e-13 77.8 87 49.4
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 6.0e-13 77.4 84 51.2
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.0e-13 77.4 87 49.4
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 6.0e-13 77.4 87 51.7
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.0e-12 76.6 87 49.4
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 1.3e-12 76.3 85 51.8
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.3e-12 76.3 87 50.6
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.7e-12 75.9 80 47.5
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.3e-12 75.5 87 47.1
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 3.0e-12 75.1 87 50.6
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 4.3e-11 71.2 89 49.4
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 9.6e-11 70.1 84 50.0
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 9.6e-11 70.1 89 47.2
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 3.6e-10 68.2 74 51.4
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 2.6e-08 62.0 87 43.7
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.2e-07 58.9 87 44.8
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 3.8e-07 58.2 49 57.1
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 6.4e-07 57.4 67 40.3
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 2.4e-06 55.5 174 28.2


User provided reference genes

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