Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p22740 Brassica napus HOM05D000675 ORTHO05D003044 7.6e-32 139.8 67 100.0
BraA08t32813Z Brassica rapa HOM05D000675 ORTHO05D003044 2.6e-24 114.8 67 83.6
BcaC02g10973 Brassica carinata HOM05D000675 ORTHO05D003044 7.9e-21 103.2 50 96.0
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 2.5e-19 98.2 102 52.0
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 1.1e-14 82.8 101 47.5
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-14 82.4 102 46.1
BolC6t35993H Brassica oleracea HOM05D000675 ORTHO05D003044 1.4e-14 82.4 62 66.1
C04p10850 Brassica napus HOM05D000675 ORTHO05D020104 4.2e-14 80.9 101 46.5
BcaC02g11836 Brassica carinata HOM05D000675 ORTHO05D003044 6.0e-13 77.0 95 47.4
BcaC09g49239 Brassica carinata HOM05D000675 ORTHO05D003044 1.0e-12 76.3 95 45.3
BcaB05g23575 Brassica carinata HOM05D000675 ORTHO05D003044 2.3e-12 75.1 95 46.3
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-10 68.2 102 38.2
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-10 68.2 47 61.7
C06p22620 Brassica napus HOM05D000675 ORTHO05D013785 2.8e-10 68.2 47 61.7
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-10 68.2 47 61.7
BolC8t48131H Brassica oleracea HOM05D000675 ORTHO05D003044 4.8e-10 67.4 47 63.8
A09p33960 Brassica napus HOM05D000675 ORTHO05D003044 8.2e-10 66.6 47 59.6
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 8.2e-10 66.6 47 59.6
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-09 66.2 46 60.9
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-09 66.2 47 59.6
A01p22900 Brassica napus HOM05D000675 ORTHO05D003044 1.4e-09 65.9 102 39.2
BraA01t02203Z Brassica rapa HOM05D000675 ORTHO05D003044 1.4e-09 65.9 102 39.2
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-09 65.5 44 61.4
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-09 65.5 46 60.9
Sp6g09660 Schrenkiella parvula HOM05D000675 ORTHO05D000378 1.8e-09 65.5 46 63.0
BolC5t30407H Brassica oleracea HOM05D000675 ORTHO05D003044 2.4e-09 65.1 47 59.6
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 3.1e-09 64.7 49 51.0
C05p16990 Brassica napus HOM05D000675 ORTHO05D003044 3.1e-09 64.7 47 59.6
BcaB06g28325 Brassica carinata HOM05D000675 ORTHO05D003044 5.3e-09 63.9 47 55.3
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 5.3e-09 63.9 99 38.4
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 6.9e-09 63.5 47 57.4
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 6.9e-09 63.5 102 38.2
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 6.9e-09 63.5 47 57.4
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 6.9e-09 63.5 47 57.4
BcaC04g21083 Brassica carinata HOM05D000675 ORTHO05D003044 1.2e-08 62.8 47 57.4
C04p39650 Brassica napus HOM05D000675 ORTHO05D003044 1.2e-08 62.8 46 54.3
C09p35930 Brassica napus HOM05D000675 ORTHO05D003044 1.2e-08 62.8 47 57.4
BolC4t25506H Brassica oleracea HOM05D000675 ORTHO05D003044 1.2e-08 62.8 46 54.3
BcaB07g33977 Brassica carinata HOM05D000675 ORTHO05D003044 1.5e-08 62.4 46 56.5
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-08 62.4 46 56.5
C04p39430 Brassica napus HOM05D000675 ORTHO05D003044 1.5e-08 62.4 46 54.3
BolC4t25508H Brassica oleracea HOM05D000675 ORTHO05D003044 1.5e-08 62.4 46 54.3
BolC4t25532H Brassica oleracea HOM05D000675 ORTHO05D003044 1.5e-08 62.4 46 54.3
BcaB01g03782 Brassica carinata HOM05D000675 ORTHO05D003044 2.0e-08 62.0 46 56.5
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-08 61.6 46 56.5
A02p36630 Brassica napus HOM05D000675 ORTHO05D003044 4.5e-08 60.8 46 58.7
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 4.5e-08 60.8 46 56.5
C04p39400 Brassica napus HOM05D000675 ORTHO05D003044 4.5e-08 60.8 46 52.2
BraA02t08658Z Brassica rapa HOM05D000675 ORTHO05D003044 4.5e-08 60.8 46 58.7
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 5.8e-08 60.5 44 59.1
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 5.8e-08 60.5 44 59.1
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 5.8e-08 60.5 50 52.0
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 5.8e-08 60.5 50 52.0
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 5.8e-08 60.5 79 43.0
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 7.6e-08 60.1 50 52.0
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 1.0e-07 59.7 49 51.0
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-07 59.7 46 54.3
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-07 59.7 46 54.3
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-07 58.9 99 36.4
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 1.7e-07 58.9 46 54.3
Sp1g33290 Schrenkiella parvula HOM05D000675 ORTHO05D014679 1.7e-07 58.9 47 55.3
BcaC03g17530 Brassica carinata HOM05D000675 ORTHO05D003044 2.2e-07 58.5 102 33.3
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-07 58.5 43 58.1
C05p25450 Brassica napus HOM05D000675 ORTHO05D003044 2.2e-07 58.5 43 58.1
BolC4t25484H Brassica oleracea HOM05D000675 ORTHO05D003044 2.2e-07 58.5 102 33.3
BcaC06g34268 Brassica carinata HOM05D000675 ORTHO05D000395 2.9e-07 58.2 66 43.9
Carub.0006s2657 Capsella rubella HOM05D000675 ORTHO05D000395 2.9e-07 58.2 46 54.3
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 3.8e-07 57.8 46 58.7
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 3.8e-07 57.8 46 54.3
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 3.8e-07 57.8 99 32.3
C07p21220 Brassica napus HOM05D000675 ORTHO05D003044 3.8e-07 57.8 46 52.2
BolC7t40949H Brassica oleracea HOM05D000675 ORTHO05D003044 3.8e-07 57.8 46 56.5
A01p19480 Brassica napus HOM05D000675 ORTHO05D003044 4.9e-07 57.4 46 56.5
C06p36630 Brassica napus HOM05D000675 ORTHO05D003044 4.9e-07 57.4 46 56.5
C09p12130 Brassica napus HOM05D000675 ORTHO05D003044 4.9e-07 57.4 99 32.3
A07p03350 Brassica napus HOM05D000675 ORTHO05D003044 6.5e-07 57.0 46 52.2
A09p51430 Brassica napus HOM05D000675 ORTHO05D003044 6.5e-07 57.0 46 52.2
A10p11800 Brassica napus HOM05D000675 ORTHO05D003044 6.5e-07 57.0 46 52.2
C02p54980 Brassica napus HOM05D000675 ORTHO05D003044 6.5e-07 57.0 102 32.4
BraA05t20771Z Brassica rapa HOM05D000675 ORTHO05D003044 6.5e-07 57.0 46 52.2
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 6.5e-07 57.0 46 52.2
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 8.4e-07 56.6 46 52.2
C03p49520 Brassica napus HOM05D000675 ORTHO05D003044 8.4e-07 56.6 46 52.2
C05p51310 Brassica napus HOM05D000675 ORTHO05D003044 8.4e-07 56.6 46 54.3
C07p05490 Brassica napus HOM05D000675 ORTHO05D003044 8.4e-07 56.6 43 60.5
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 8.4e-07 56.6 46 54.3
C09p40920 Brassica napus HOM05D000675 ORTHO05D003044 8.4e-07 56.6 46 52.2
BolC9t56973H Brassica oleracea HOM05D000675 ORTHO05D003044 8.4e-07 56.6 46 52.2
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 56.2 46 52.2
BcaC01g02115 Brassica carinata HOM05D000675 ORTHO05D003044 1.1e-06 56.2 83 34.9
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 56.2 46 52.2
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 56.2 102 33.3
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-06 56.2 102 33.3
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-06 56.2 102 33.3
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-06 55.8 43 53.5
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-06 55.8 43 62.8
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-06 55.1 46 50.0
C03p68420 Brassica napus HOM05D000675 ORTHO05D003044 2.5e-06 55.1 46 50.0
BcaC08g46630 Brassica carinata HOM05D000675 ORTHO05D003044 3.2e-06 54.7 86 33.7
BcaC05g25609 Brassica carinata HOM05D000675 ORTHO05D021717 4.2e-06 54.3 50 48.0
C06p13240 Brassica napus HOM05D000675 ORTHO05D003044 4.2e-06 54.3 49 49.0
BolC6t36482H Brassica oleracea HOM05D000675 ORTHO05D003044 4.2e-06 54.3 49 49.0
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 4.2e-06 54.3 46 52.2
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 5.5e-06 53.9 43 55.8
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 9.3e-06 53.1 47 48.9
BcaC09g50794 Brassica carinata HOM05D000675 ORTHO05D013510 9.3e-06 53.1 46 54.3
C09p22720 Brassica napus HOM05D000675 ORTHO05D003044 9.3e-06 53.1 43 53.5
BolC9t55189H Brassica oleracea HOM05D000675 ORTHO05D003044 9.3e-06 53.1 43 53.5


User provided reference genes

Program Settings