Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 9.3e-113 410.2 208 100.0
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 7.0e-92 340.9 208 87.0
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 1.3e-85 320.1 190 87.4
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 3.1e-84 315.5 208 84.1
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 1.5e-78 296.6 205 77.1
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 1.9e-73 279.6 176 84.1
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 1.8e-55 219.9 186 66.7
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 6.8e-55 218.0 205 61.0
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 1.9e-44 183.3 206 54.9
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 5.4e-44 181.8 206 54.9
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 9.2e-44 181.0 108 80.6
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 9.2e-44 181.0 206 53.9
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 2.3e-42 176.4 206 52.9
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 2.3e-42 176.4 206 52.9
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 6.6e-42 174.9 206 52.4
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 5.6e-41 171.8 206 50.0
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 1.2e-40 170.6 206 50.0
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 2.1e-40 169.9 206 49.5
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 4.7e-40 168.7 206 51.0
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 1.5e-38 163.7 206 49.5
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 4.4e-38 162.2 206 49.0
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 5.8e-38 161.8 206 51.9
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 1.2e-35 154.1 189 53.4
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 4.6e-35 152.1 213 45.5
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 5.1e-34 148.7 207 45.9
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 5.1e-34 148.7 212 44.8
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 5.1e-34 148.7 212 43.9
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 1.1e-33 147.5 212 45.8
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 2.5e-33 146.4 212 44.3
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 4.3e-33 145.6 206 45.1
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 5.6e-33 145.2 212 43.9
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 5.6e-33 145.2 212 44.3
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 5.6e-33 145.2 212 43.4
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 9.5e-33 144.4 212 44.3
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 1.2e-32 144.1 212 43.9
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 1.6e-32 143.7 212 43.9
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 1.6e-32 143.7 212 43.4
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 2.1e-32 143.3 212 43.4
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 2.1e-32 143.3 212 42.5
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 2.1e-32 143.3 212 43.9
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.8e-32 142.9 212 42.5
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.8e-32 142.9 212 42.5
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 2.8e-32 142.9 208 44.2
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 2.8e-32 142.9 212 43.4
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 2.8e-32 142.9 212 42.5
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 3.6e-32 142.5 212 43.9
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 3.6e-32 142.5 206 44.7
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 6.2e-32 141.7 212 42.5
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 6.2e-32 141.7 206 43.7
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 6.2e-32 141.7 212 43.4
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 8.1e-32 141.4 212 42.9
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 1.1e-31 141.0 212 43.4
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 1.1e-31 141.0 212 42.9
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 1.1e-31 141.0 213 44.6
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 1.1e-31 141.0 212 43.4
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.8e-31 140.2 209 43.5
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.8e-31 140.2 209 43.5
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 2.4e-31 139.8 212 42.5
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.4e-31 139.8 209 43.1
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 4.0e-31 139.0 212 41.5
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 5.2e-31 138.7 212 42.5
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 6.8e-31 138.3 212 42.0
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 6.8e-31 138.3 212 42.5
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 6.8e-31 138.3 212 42.9
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 8.9e-31 137.9 212 43.9
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 8.9e-31 137.9 206 42.7
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 1.5e-30 137.1 212 42.5
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 2.0e-30 136.7 213 42.3
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 2.6e-30 136.3 212 42.0
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 4.4e-30 135.6 212 40.1
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 1.3e-29 134.0 206 44.2
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.7e-29 133.7 206 42.7
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 3.8e-29 132.5 206 42.2
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 4.9e-29 132.1 212 42.0
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 6.4e-29 131.7 206 40.8
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 6.4e-29 131.7 206 41.7
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 8.4e-29 131.3 212 41.0
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 8.4e-29 131.3 206 40.8
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 8.4e-29 131.3 212 42.0
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 1.9e-28 130.2 208 41.3
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 3.2e-28 129.4 212 40.1
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 1.6e-27 127.1 206 39.8
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 2.1e-27 126.7 206 42.7
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 2.1e-27 126.7 212 39.6
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 3.5e-27 125.9 251 35.9
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 3.5e-27 125.9 206 40.3
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 7.8e-27 124.8 213 38.5
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 7.8e-27 124.8 206 39.8
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 3.9e-26 122.5 213 37.6
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 6.6e-26 121.7 213 38.0
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.5e-25 120.6 234 35.9
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 1.5e-25 120.6 213 39.0
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 1.5e-25 120.6 212 39.2
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 1.9e-25 120.2 212 39.2
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 7.3e-25 118.2 223 36.3
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 9.6e-25 117.9 212 38.2
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 1.6e-24 117.1 214 36.9
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 4.7e-24 115.5 206 37.4
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 4.7e-24 115.5 212 37.7
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 1.8e-23 113.6 153 49.0
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 6.9e-23 111.7 94 69.1
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 5.8e-22 108.6 213 37.1
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 8.4e-21 104.8 147 45.6
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 2.4e-20 103.2 214 36.0
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 7.1e-20 101.7 143 44.8
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 7.8e-19 98.2 105 55.2
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 7.8e-19 98.2 146 43.8
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 1.9e-17 93.6 106 55.7
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 9.6e-17 91.3 213 32.4
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 2.8e-16 89.7 206 34.5
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 3.6e-16 89.4 102 52.9
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.1e-15 86.3 211 32.7
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 2.0e-14 83.6 41 95.1
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 7.6e-14 81.6 110 45.5
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 9.9e-14 81.3 213 31.9
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 9.9e-14 81.3 213 31.9
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 1.7e-13 80.5 213 31.9
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 2.9e-13 79.7 41 90.2
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 1.9e-12 77.0 68 60.3
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 2.4e-12 76.6 133 38.3
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 5.4e-12 75.5 41 87.8
Lsat_1_v5_gn_1_61800 Lactuca sativa HOM05D005428 ORTHO05D002547 2.4e-07 60.1 41 65.9
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 4.0e-07 59.3 136 32.4
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 4.0e-07 59.3 41 58.5
HanXRQChr14g0433731 Helianthus annuus HOM05D005703 ORTHO05D006643 1.5e-06 57.4 36 83.3
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 4.5e-06 55.8 81 38.3


User provided reference genes

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