Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p21560 Brassica napus HOM05D054506 ORTHO05D042355 2.6e-40 168.3 86 100.0
BolC4t23681H Brassica oleracea HOM05D054506 ORTHO05D042355 2.8e-39 164.9 84 100.0
Thhalv10016787m.g Eutrema salsugineum HOM05D001632 ORTHO05D001534 1.2e-18 96.3 91 63.7
AL4G23970 Arabidopsis lyrata HOM05D001632 ORTHO05D001534 3.4e-16 88.2 97 58.8
BolC4t27375H Brassica oleracea HOM05D001632 ORTHO05D001534 1.7e-15 85.9 91 60.4
Sp4g12170 Schrenkiella parvula HOM05D001632 ORTHO05D001534 2.8e-15 85.1 64 70.3
BcaB06g28305 Brassica carinata HOM05D001632 ORTHO05D001534 6.3e-15 84.0 64 73.4
A04p22420 Brassica napus HOM05D001632 ORTHO05D001534 6.3e-15 84.0 91 59.3
AT2G29410 Arabidopsis thaliana HOM05D001632 ORTHO05D001534 1.1e-14 83.2 66 68.2
C04p58570 Brassica napus HOM05D001632 ORTHO05D001534 1.2e-13 79.7 78 55.1
BcaC02g08087 Brassica carinata HOM05D001632 ORTHO05D001534 2.0e-13 79.0 64 68.8
CARHR122690 Cardamine hirsuta HOM05D001632 ORTHO05D001534 3.5e-13 78.2 66 63.6
Carub.0004s1047 Capsella rubella HOM05D001632 ORTHO05D001534 4.5e-13 77.8 96 55.2
BraA04t17790Z Brassica rapa HOM05D001632 ORTHO05D001534 2.9e-12 75.1 64 60.9
BcaB02g10245 Brassica carinata HOM05D001632 ORTHO05D001534 4.7e-10 67.8 37 91.9
BcaB02g10246 Brassica carinata HOM05D001632 ORTHO05D001534 2.3e-09 65.5 42 81.0
A05p15980 Brassica napus HOM05D001632 ORTHO05D001534 5.7e-08 60.8 42 78.6
Aa31LG5G7020 Aethionema arabicum HOM05D001632 ORTHO05D001534 3.1e-06 55.1 63 47.6
THA.LOC104815770 Tarenaya hassleriana HOM05D001632 ORTHO05D001534 5.4e-06 54.3 64 48.4


User provided reference genes

Program Settings