Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p20030 Brassica napus HOM05D021172 ORTHO05D039195 2.0e-152 542.3 268 100.0
BcaC05g28551 Brassica carinata HOM05D021172 ORTHO05D039195 3.7e-21 106.3 97 59.8
BolC4t25327H Brassica oleracea HOM05D021172 ORTHO05D027620 2.3e-18 97.1 214 38.8
C09p23080 Brassica napus HOM05D021172 ORTHO05D027620 4.3e-09 66.2 144 39.6
BolC9t55226H Brassica oleracea HOM05D021172 ORTHO05D027620 4.3e-09 66.2 144 39.6
C03p78850 Brassica napus HOM05D020247 ORTHO05D102625 7.3e-09 65.5 93 43.0
A02p19060 Brassica napus HOM05D002016 ORTHO05D002251 3.1e-07 60.1 125 40.0
BraA02t06953Z Brassica rapa HOM05D002016 ORTHO05D002251 3.1e-07 60.1 125 40.0
Carub.0002s2085 Capsella rubella HOM05D002016 ORTHO05D002251 3.1e-07 60.1 125 39.2
Thhalv10019079m.g Eutrema salsugineum HOM05D002016 ORTHO05D002251 5.2e-07 59.3 125 39.2
A07p39930 Brassica napus HOM05D002016 ORTHO05D002251 6.8e-07 58.9 125 39.2
BraA07t31539Z Brassica rapa HOM05D002016 ORTHO05D002251 6.8e-07 58.9 125 39.2
BcaC08g46835 Brassica carinata HOM05D002016 ORTHO05D002251 1.2e-06 58.2 120 38.3
Thhalv10019083m.g Eutrema salsugineum HOM05D002016 ORTHO05D002251 1.5e-06 57.8 125 38.4
C06p48160 Brassica napus HOM05D002016 ORTHO05D002251 2.0e-06 57.4 124 38.7
BolC2t09187H Brassica oleracea HOM05D002016 ORTHO05D002251 2.6e-06 57.0 121 40.5
AL2G33960 Arabidopsis lyrata HOM05D002016 ORTHO05D002251 4.4e-06 56.2 121 38.8
BcaC02g09695 Brassica carinata HOM05D021172 ORTHO05D027620 4.4e-06 56.2 100 41.0
C02p31560 Brassica napus HOM05D002016 ORTHO05D002251 5.8e-06 55.8 121 40.5
BcaC03g15477 Brassica carinata HOM05D002016 ORTHO05D002251 7.5e-06 55.5 121 40.5
AL2G33940 Arabidopsis lyrata HOM05D002016 ORTHO05D002251 9.8e-06 55.1 121 38.8
AT1G74060 Arabidopsis thaliana HOM05D002016 ORTHO05D002251 9.8e-06 55.1 121 38.8
BcaB05g24823 Brassica carinata HOM05D002016 ORTHO05D002251 9.8e-06 55.1 120 40.8


User provided reference genes

Program Settings