Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-72 275.8 130 100.0
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-41 170.6 174 53.4
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-40 169.1 174 53.4
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-39 166.8 174 52.3
C02p40950 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-34 148.7 72 97.2
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-26 122.9 140 46.4
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 8.6e-24 114.0 102 52.0
BraA01t01719Z Brassica rapa HOM05D003839 ORTHO05D003352 3.3e-23 112.1 72 68.1
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-19 98.2 103 41.7
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 4.9e-19 98.2 102 45.1
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-18 97.1 107 41.1
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-18 97.1 107 41.1
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-18 96.3 103 41.7
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-18 96.3 61 67.2
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-18 96.3 103 41.7
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.9e-18 96.3 103 41.7
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-18 95.9 103 41.7
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 2.4e-18 95.9 103 41.7
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-18 94.7 103 41.7
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-18 94.7 103 41.7
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 5.4e-18 94.7 103 41.7
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 7.1e-18 94.4 103 41.7
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 7.1e-18 94.4 103 41.7
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-17 93.6 107 40.2
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-17 93.6 103 41.7
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-17 92.8 98 41.8
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-17 92.8 103 40.8
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 2.1e-17 92.8 98 41.8
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 3.5e-17 92.0 104 40.4
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-17 91.7 89 47.2
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 7.8e-17 90.9 103 40.8
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.0e-16 90.5 75 53.3
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-16 89.7 98 42.9
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-16 89.7 103 41.7
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-16 88.6 103 40.8
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.9e-16 88.6 94 42.6
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-16 87.8 103 40.8
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 8.7e-16 87.4 104 39.4
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 8.7e-16 87.4 107 39.3
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 8.7e-16 87.4 104 41.3
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.1e-15 87.0 124 38.7
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.5e-15 85.9 102 36.3
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-15 85.5 116 38.8
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-15 85.5 103 37.9
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-15 84.7 102 40.2
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 5.6e-15 84.7 93 39.8
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-15 84.3 102 40.2
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-14 83.6 102 39.2
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-14 82.8 107 39.3
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 3.6e-14 82.0 99 39.4
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-14 81.6 93 36.6
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 6.2e-14 81.3 86 41.9
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 6.2e-14 81.3 86 41.9
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 6.2e-14 81.3 80 46.2
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-13 80.1 88 39.8
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.4e-13 80.1 61 52.5
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-13 78.6 93 40.9
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-13 78.6 93 36.6
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-13 78.6 104 35.6
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-13 78.6 92 37.0
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-13 78.6 92 37.0
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-13 78.2 94 39.4
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-13 78.2 104 35.6
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 5.3e-13 78.2 103 32.0
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 6.9e-13 77.8 94 39.4
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 9.0e-13 77.4 103 32.0
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 9.0e-13 77.4 103 33.0
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-12 77.0 116 36.2
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 1.2e-12 77.0 93 38.7
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-12 77.0 57 54.4
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-12 76.6 93 43.0
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-12 76.3 82 40.2
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-12 75.9 103 31.1
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 4.4e-12 75.1 74 48.6
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 4.4e-12 75.1 102 35.3
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 5.8e-12 74.7 102 35.3
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 9.9e-12 73.9 103 31.1
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-11 73.2 57 52.6
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-11 72.8 92 39.1
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-11 72.8 103 29.1
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-11 72.4 87 40.2
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-11 72.4 99 38.4
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-11 72.0 105 36.2
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-11 71.6 89 40.4
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-11 71.6 92 39.1
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-11 71.6 89 40.4
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 8.4e-11 70.9 104 35.6
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-10 70.5 99 38.4
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-10 69.3 89 39.3
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-10 68.6 89 39.3
BcaB06g28304 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-10 68.2 54 51.9
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-10 68.2 103 34.0
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 7.1e-10 67.8 89 39.3
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 9.3e-10 67.4 61 47.5
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 9.3e-10 67.4 103 35.0
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 9.3e-10 67.4 61 47.5
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-09 67.0 67 44.8
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.6e-09 66.6 105 34.3
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 1.6e-09 66.6 118 34.7
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-09 65.1 62 46.8
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 6.0e-09 64.7 105 33.3
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.0e-09 64.7 55 49.1
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 7.8e-09 64.3 112 33.9
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-08 63.5 58 50.0
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-08 63.5 94 31.9
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-08 63.5 128 27.3
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 1.3e-08 63.5 128 27.3
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 2.3e-08 62.8 112 33.9
Thhalv10027513m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.0e-08 62.4 52 42.3
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 5.1e-08 61.6 103 33.0
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 6.6e-08 61.2 128 27.3
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 6.6e-08 61.2 128 27.3
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-07 60.5 103 29.1
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-07 60.5 46 56.5
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 1.1e-07 60.5 104 26.9
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 1.5e-07 60.1 104 26.9
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-07 60.1 103 32.0
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 1.5e-07 60.1 73 42.5
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 1.9e-07 59.7 104 26.9
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-07 59.7 49 49.0
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-07 58.9 103 34.0
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 4.3e-07 58.5 123 32.5
BcaC08g44281 Brassica carinata HOM05D003839 ORTHO05D039180 5.6e-07 58.2 82 42.7
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 5.6e-07 58.2 94 27.7
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 5.6e-07 58.2 94 27.7
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 9.6e-07 57.4 51 41.2
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 9.6e-07 57.4 51 41.2
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 9.6e-07 57.4 51 41.2
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-06 57.0 49 49.0
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-06 56.6 104 26.0
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-06 56.6 103 31.1
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 55.8 54 40.7
BcaB03g14108 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-06 55.1 62 40.3
BcaC07g37552 Brassica carinata HOM05D010997 ORTHO05D014498 4.8e-06 55.1 95 33.7
A06p31430 Brassica napus HOM05D003839 ORTHO05D003352 8.1e-06 54.3 71 38.0


User provided reference genes

Program Settings