Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p17670 Brassica napus HOM05D032973 ORTHO05D021643 7.9e-112 407.1 207 100.0
BolC4t23314H Brassica oleracea HOM05D000459 ORTHO05D021643 5.7e-46 188.3 141 68.8
Sp4g14340 Schrenkiella parvula HOM05D000459 ORTHO05D021643 6.2e-32 141.7 124 62.1
C05p13800 Brassica napus HOM05D000459 ORTHO05D021643 1.3e-13 80.9 80 55.0
BcaC05g25638 Brassica carinata HOM05D000459 ORTHO05D021643 7.1e-12 75.1 80 53.8
C03p27400 Brassica napus HOM05D032973 ORTHO05D101890 7.1e-12 75.1 41 90.2
C07p20640 Brassica napus HOM05D032973 ORTHO05D100186 1.3e-10 70.9 40 90.0
AL2G41100 Arabidopsis lyrata HOM05D000459 ORTHO05D002429 8.7e-10 68.2 164 34.8
A06p11650 Brassica napus HOM05D009689 ORTHO05D012057 1.5e-09 67.4 138 34.1
AT1G80400 Arabidopsis thaliana HOM05D000459 ORTHO05D002429 5.6e-09 65.5 160 35.6
Thecc.06G082400 Theobroma cacao HOM05D000459 ORTHO05D002429 1.2e-08 64.3 147 36.7
BcaB05g25271 Brassica carinata HOM05D000459 ORTHO05D002429 2.8e-08 63.2 157 34.4
BcaC03g15970 Brassica carinata HOM05D000459 ORTHO05D002429 3.6e-08 62.8 163 34.4
Duzib235G1543 Durio zibethinus HOM05D000459 ORTHO05D002429 6.2e-08 62.0 147 35.4
Aa31LG4G670 Aethionema arabicum HOM05D000459 ORTHO05D002429 8.1e-08 61.6 162 33.3
Carub.0002s2717 Capsella rubella HOM05D000459 ORTHO05D002429 1.1e-07 61.2 160 33.1
Actinidia08832 Actinidia chinensis HOM05D000459 ORTHO05D002429 1.4e-07 60.8 126 37.3
CARHR074840 Cardamine hirsuta HOM05D000459 ORTHO05D002429 1.4e-07 60.8 164 32.9
Gohir.A06G187900 Gossypium hirsutum HOM05D000459 ORTHO05D002429 1.4e-07 60.8 126 38.1
BolC2t09745H Brassica oleracea HOM05D000459 ORTHO05D002429 1.8e-07 60.5 164 34.1
COL.COLO4_30326 Corchorus olitorius HOM05D000459 ORTHO05D002429 1.8e-07 60.5 150 35.3
C02p37350 Brassica napus HOM05D000459 ORTHO05D002429 2.4e-07 60.1 164 33.5
Gohir.D06G194000 Gossypium hirsutum HOM05D000459 ORTHO05D002429 4.0e-07 59.3 134 36.6
Gorai.010G227900 Gossypium raimondii HOM05D000459 ORTHO05D002429 5.3e-07 58.9 134 36.6
A02p23590 Brassica napus HOM05D000459 ORTHO05D002429 6.9e-07 58.5 136 35.3
BraA02t07351Z Brassica rapa HOM05D000459 ORTHO05D002429 6.9e-07 58.5 136 35.3
Gohir.A10G078800 Gossypium hirsutum HOM05D000459 ORTHO05D002429 9.0e-07 58.2 124 36.3
Sp5g35410 Schrenkiella parvula HOM05D000459 ORTHO05D002429 1.2e-06 57.8 167 31.7
Lsat_1_v5_gn_8_94540 Lactuca sativa HOM05D000459 ORTHO05D002429 1.5e-06 57.4 87 42.5
Duzib192G0916 Durio zibethinus HOM05D000459 ORTHO05D002429 2.6e-06 56.6 139 35.3
Peaxi162Scf00256g00712 Petunia axillaris HOM05D000459 ORTHO05D002429 2.6e-06 56.6 117 33.3
Gohir.D10G072700 Gossypium hirsutum HOM05D000459 ORTHO05D002429 3.4e-06 56.2 124 35.5
Gorai.011G078300 Gossypium raimondii HOM05D000459 ORTHO05D002429 3.4e-06 56.2 124 35.5
vmacro16942 Vaccinium macrocarpon HOM05D000459 ORTHO05D002429 3.4e-06 56.2 90 42.2
Thhalv10018651m.g Eutrema salsugineum HOM05D000459 ORTHO05D002429 4.4e-06 55.8 161 31.7
Prupe.3G074400 Prunus persica HOM05D000459 ORTHO05D002429 4.4e-06 55.8 144 33.3
THA.LOC104812473 Tarenaya hassleriana HOM05D000459 ORTHO05D002429 7.6e-06 55.1 133 34.6


User provided reference genes

Program Settings