Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 2.5e-66 255.4 134 100.0
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 2.5e-66 255.4 134 100.0
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 1.3e-62 243.0 134 95.5
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 1.4e-61 239.6 134 94.0
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 1.8e-61 239.2 134 94.8
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 1.6e-60 236.1 134 93.3
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 1.6e-60 236.1 134 93.3
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 4.4e-55 218.0 132 84.1
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 1.3e-54 216.5 134 82.1
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 1.1e-53 213.4 130 83.8
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.4e-53 213.0 117 92.3
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 3.1e-53 211.8 118 90.7
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 7.0e-53 210.7 133 81.2
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 9.1e-53 210.3 117 91.5
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 2.0e-52 209.1 130 82.3
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 2.0e-52 209.1 132 81.1
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 2.7e-52 208.8 133 78.9
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 4.5e-52 208.0 131 82.4
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 1.7e-51 206.1 134 83.6
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 1.7e-51 206.1 134 83.6
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 1.7e-51 206.1 134 83.6
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 1.7e-51 206.1 134 83.6
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 2.9e-51 205.3 134 82.8
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 3.8e-51 204.9 131 80.2
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 1.1e-50 203.4 133 77.4
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 1.1e-50 203.4 107 94.4
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 1.5e-50 203.0 134 82.1
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 1.5e-50 203.0 133 82.0
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 1.9e-50 202.6 130 78.5
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 2.5e-50 202.2 132 78.8
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 7.2e-50 200.7 133 78.2
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 7.2e-50 200.7 131 80.2
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 7.2e-50 200.7 134 75.4
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 1.2e-49 199.9 113 87.6
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 1.6e-49 199.5 134 81.3
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 2.1e-49 199.1 129 77.5
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.7e-49 198.7 134 79.9
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 3.6e-49 198.4 133 77.4
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 4.7e-49 198.0 134 79.9
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 8.0e-49 197.2 131 74.0
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 1.0e-48 196.8 134 76.9
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 4.0e-48 194.9 106 90.6
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 4.0e-48 194.9 133 74.4
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 6.8e-48 194.1 134 79.1
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 8.8e-48 193.7 134 79.1
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 2.0e-47 192.6 130 78.5
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 2.6e-47 192.2 133 72.9
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 3.4e-47 191.8 106 89.6
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 5.7e-47 191.0 134 73.9
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.7e-46 189.5 108 86.1
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 2.8e-46 188.7 102 91.2
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 2.8e-46 188.7 102 91.2
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 2.8e-46 188.7 102 90.2
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 3.7e-46 188.3 102 90.2
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 3.7e-46 188.3 112 83.0
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 8.3e-46 187.2 133 72.9
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.1e-45 186.8 141 70.2
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.1e-45 186.8 141 70.2
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 1.4e-45 186.4 102 89.2
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 1.8e-45 186.0 102 89.2
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 1.8e-45 186.0 102 89.2
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.8e-45 186.0 104 86.5
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 7.0e-45 184.1 105 83.8
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 7.0e-45 184.1 105 83.8
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-44 183.3 106 94.3
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.2e-44 183.3 106 94.3
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 1.6e-44 183.0 106 84.0
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.6e-44 183.0 140 67.9
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 2.0e-44 182.6 112 78.6
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 2.7e-44 182.2 107 84.1
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 2.7e-44 182.2 107 84.1
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 5.9e-44 181.0 101 86.1
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 7.7e-44 180.6 130 72.3
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 1.0e-43 180.3 102 84.3
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 1.3e-43 179.9 104 84.6
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.3e-43 179.9 104 84.6
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.3e-43 179.9 104 84.6
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 1.3e-43 179.9 104 84.6
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 1.3e-43 179.9 105 84.8
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 1.3e-43 179.9 105 84.8
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 1.3e-43 179.9 101 85.1
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 1.3e-43 179.9 105 83.8
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 1.7e-43 179.5 101 85.1
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 3.8e-43 178.3 108 81.5
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 5.0e-43 177.9 106 91.5
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 6.6e-43 177.6 127 68.5
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 8.6e-43 177.2 101 84.2
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 8.6e-43 177.2 101 82.2
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 8.6e-43 177.2 102 84.3
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 8.6e-43 177.2 101 82.2
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 1.1e-42 176.8 101 81.2
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.5e-42 176.4 101 81.2
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 3.3e-42 175.3 101 83.2
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 3.3e-42 175.3 101 80.2
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 3.3e-42 175.3 120 73.3
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 5.6e-42 174.5 101 83.2
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 5.6e-42 174.5 101 84.2
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 1.2e-41 173.3 105 79.0
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 2.1e-41 172.6 101 80.2
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 2.8e-41 172.2 105 78.1
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 3.6e-41 171.8 133 67.7
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 3.6e-41 171.8 133 66.2
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 6.1e-41 171.0 102 79.4
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 8.0e-41 170.6 130 67.7
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 1.0e-40 170.2 131 67.9
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 1.8e-40 169.5 102 79.4
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 2.3e-40 169.1 101 82.2
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 3.0e-40 168.7 137 67.2
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 6.8e-40 167.5 102 77.5
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 8.9e-40 167.2 102 77.5
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 8.9e-40 167.2 112 76.8
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 1.2e-39 166.8 102 75.5
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.5e-39 166.4 141 66.0
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 2.0e-39 166.0 131 65.6
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 2.0e-39 166.0 108 73.1
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 2.0e-39 166.0 113 76.1
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 3.4e-39 165.2 133 66.9
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.4e-39 165.2 108 73.1
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 3.4e-39 165.2 102 76.5
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 3.4e-39 165.2 134 64.2
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 4.4e-39 164.9 132 65.9
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 5.7e-39 164.5 133 63.9
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 9.8e-39 163.7 132 66.7
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 1.3e-38 163.3 132 65.2
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 1.3e-38 163.3 108 75.0
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 2.9e-38 162.2 108 72.2
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 4.9e-38 161.4 102 76.5
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 4.9e-38 161.4 137 64.2
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.4e-37 159.8 134 64.2
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 1.8e-37 159.5 134 62.7
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.6e-36 156.4 147 60.5
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 7.8e-36 154.1 112 74.1
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 1.0e-35 153.7 134 67.2
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 1.3e-35 153.3 107 71.0
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 7.3e-34 147.5 127 61.4
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 3.6e-33 145.2 133 57.1
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 4.0e-32 141.7 108 72.2
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 5.4e-29 131.3 100 64.0
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.7e-27 126.3 115 56.5
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.3e-27 125.9 116 56.0
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 3.6e-25 118.6 102 60.8
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 8.9e-24 114.0 87 75.9
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 2.0e-23 112.8 106 64.2
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.3e-22 110.2 129 54.3
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 1.7e-22 109.8 82 74.4
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.9e-22 109.0 113 48.7
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.9e-22 109.0 113 48.7
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 3.2e-21 105.5 79 68.4
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 9.2e-21 104.0 109 54.1
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 5.1e-19 98.2 84 59.5
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 4.9e-14 81.6 44 93.2
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 3.2e-13 79.0 45 80.0
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 9.2e-13 77.4 49 71.4
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 9.2e-13 77.4 71 62.0
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 4.6e-12 75.1 45 77.8
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 1.7e-11 73.2 113 37.2
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 8.6e-11 70.9 40 77.5
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 8.6e-11 70.9 152 31.6
A04p31200 Brassica napus HOM05D063913 ORTHO05D039988 1.7e-06 56.6 48 72.9


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