Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p15230 Brassica napus HOM05D013287 ORTHO05D000395 1.2e-88 329.7 160 100.0
BcaC04g20849 Brassica carinata HOM05D013287 ORTHO05D017501 4.3e-17 92.0 45 95.6
C09p38500 Brassica napus HOM05D013287 ORTHO05D017501 4.3e-17 92.0 45 95.6
BolC9t56707H Brassica oleracea HOM05D013287 ORTHO05D017501 4.3e-17 92.0 45 95.6
C04p67910 Brassica napus HOM05D013287 ORTHO05D017501 7.4e-17 91.3 103 48.5
BolC4t28296H Brassica oleracea HOM05D013287 ORTHO05D017501 7.4e-17 91.3 103 48.5
A09p30000 Brassica napus HOM05D000675 ORTHO05D000395 1.7e-13 80.1 58 69.0
BraA09t38562Z Brassica rapa HOM05D000675 ORTHO05D002086 1.7e-13 80.1 58 69.0
A05p25780 Brassica napus HOM05D000675 ORTHO05D000395 4.9e-13 78.6 58 67.2
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-12 77.0 89 51.7
BcaB06g25860 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-12 76.3 80 55.0
BcaB03g15593 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-12 75.5 36 94.4
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-12 75.5 36 94.4
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 5.5e-12 75.1 36 94.4
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 3.5e-11 72.4 36 91.7
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 7.9e-11 71.2 36 88.9
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 1.8e-10 70.1 60 60.0
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 6.7e-10 68.2 58 62.1
BcaC08g45572 Brassica carinata HOM05D000675 ORTHO05D000395 6.7e-10 68.2 59 59.3
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 6.7e-10 68.2 59 59.3
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-08 63.9 90 42.2
BolC6t37964H Brassica oleracea HOM05D013287 ORTHO05D105297 1.3e-08 63.9 58 58.6
C06p28030 Brassica napus HOM05D013287 ORTHO05D017501 2.2e-08 63.2 33 87.9
BcaC01g01732 Brassica carinata HOM05D000675 ORTHO05D000395 3.7e-08 62.4 39 66.7
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-08 62.0 46 63.0
BcaC01g02628 Brassica carinata HOM05D000675 ORTHO05D000395 8.2e-08 61.2 39 69.2
A09p30140 Brassica napus HOM05D000675 ORTHO05D000395 8.2e-08 61.2 33 81.8
A09p50420 Brassica napus HOM05D000675 ORTHO05D000395 8.2e-08 61.2 33 81.8
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 8.2e-08 61.2 38 71.1
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 8.2e-08 61.2 38 71.1
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-07 60.8 38 68.4
BcaB02g11265 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-07 60.5 39 66.7
BcaC09g49895 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-07 60.1 65 49.2
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 1.8e-07 60.1 38 68.4
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 1.8e-07 60.1 38 68.4
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 4.1e-07 58.9 38 68.4
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 4.1e-07 58.9 54 57.4
C05p25460 Brassica napus HOM05D000675 ORTHO05D000395 5.3e-07 58.5 38 65.8
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 5.3e-07 58.5 49 59.2
A03p67120 Brassica napus HOM05D013287 ORTHO05D017501 6.9e-07 58.2 27 96.3
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 6.9e-07 58.2 38 65.8
BraA01t02766Z Brassica rapa HOM05D013287 ORTHO05D017501 6.9e-07 58.2 27 96.3
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 6.9e-07 58.2 38 65.8
BcaB05g24010 Brassica carinata HOM05D000675 ORTHO05D000395 9.0e-07 57.8 38 65.8
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 9.0e-07 57.8 38 68.4
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 9.0e-07 57.8 72 51.4
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 9.0e-07 57.8 60 50.0
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-06 57.4 36 63.9
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-06 57.4 44 59.1
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-06 57.0 38 65.8
C01p14780 Brassica napus HOM05D000675 ORTHO05D000395 1.5e-06 57.0 38 65.8
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-06 56.6 34 70.6
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 56.2 39 64.1
BcaB01g04057 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 56.2 39 64.1
BcaC09g49037 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 56.2 39 64.1
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 56.2 62 48.4
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-06 56.2 51 52.9
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 2.6e-06 56.2 60 48.3
BcaC09g51112 Brassica carinata HOM05D000675 ORTHO05D000395 3.4e-06 55.8 39 64.1
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-06 55.5 39 59.0
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 5.9e-06 55.1 34 70.6
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 5.9e-06 55.1 35 65.7
BcaC08g45974 Brassica carinata HOM05D000675 ORTHO05D000395 5.9e-06 55.1 34 70.6
C03p49550 Brassica napus HOM05D000675 ORTHO05D040856 5.9e-06 55.1 33 75.8
BolC2t12302H Brassica oleracea HOM05D000675 ORTHO05D000395 5.9e-06 55.1 34 70.6
BolC3t17251H Brassica oleracea HOM05D000675 ORTHO05D000395 5.9e-06 55.1 33 75.8
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 5.9e-06 55.1 34 70.6
BolC9t58655H Brassica oleracea HOM05D000675 ORTHO05D000395 5.9e-06 55.1 38 60.5
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 5.9e-06 55.1 61 45.9
BcaB04g18329 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-05 54.3 39 64.1
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-05 54.3 55 54.5


User provided reference genes

Program Settings