Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p14710 Brassica napus HOM05D008719 ORTHO05D010898 1.1e-108 396.7 208 100.0
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 1.1e-73 280.4 250 68.4
A05p11350 Brassica napus HOM05D008719 ORTHO05D010898 1.2e-59 233.8 231 64.9
Thhalv10017155m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 8.3e-53 211.1 263 54.8
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 2.7e-51 206.1 208 61.5
BcaB06g28746 Brassica carinata HOM05D008719 ORTHO05D010898 1.3e-50 203.8 250 56.0
Carub.0004s1595 Capsella rubella HOM05D008719 ORTHO05D010898 5.2e-47 191.8 265 53.6
AT2G34310 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 5.8e-46 188.3 259 52.5
BraA04t18131Z Brassica rapa HOM05D008719 ORTHO05D010898 9.8e-46 187.6 245 54.7
C04p63660 Brassica napus HOM05D008719 ORTHO05D010898 1.3e-45 187.2 245 55.1
A04p26270 Brassica napus HOM05D008719 ORTHO05D010898 3.7e-45 185.7 245 54.3
CARHR128380 Cardamine hirsuta HOM05D008719 ORTHO05D010898 6.4e-45 184.9 238 53.4
BolC4t27834H Brassica oleracea HOM05D008719 ORTHO05D010898 1.7e-42 176.8 244 54.1
AL4G30240 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 8.6e-42 174.5 258 50.0
Sp4g16580 Schrenkiella parvula HOM05D008719 ORTHO05D010898 1.1e-39 167.5 262 47.7
Thhalv10008596m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 3.6e-32 142.5 252 44.4
CARHR028920 Cardamine hirsuta HOM05D008719 ORTHO05D010898 3.8e-29 132.5 250 44.4
THA.LOC104820622 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 1.6e-24 117.1 209 45.5
Carub.0001s2776 Capsella rubella HOM05D008719 ORTHO05D010898 2.1e-24 116.7 246 41.5
Sp1g25470 Schrenkiella parvula HOM05D008719 ORTHO05D010898 2.1e-24 116.7 264 40.9
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 5.3e-23 112.1 250 42.0
AL1G43370 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 4.9e-21 105.5 263 37.3
A09p36830 Brassica napus HOM05D008719 ORTHO05D010898 4.2e-20 102.4 222 41.4
BraA09t39201Z Brassica rapa HOM05D008719 ORTHO05D010898 4.2e-20 102.4 222 41.4
Aa31LG6G6070 Aethionema arabicum HOM05D008719 ORTHO05D010898 2.1e-19 100.1 334 32.0
THA.LOC104814270 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 1.3e-18 97.4 211 43.1
BcaB03g13879 Brassica carinata HOM05D008719 ORTHO05D010898 3.0e-18 96.3 204 41.7
A08p25000 Brassica napus HOM05D008719 ORTHO05D010898 6.6e-18 95.1 245 40.4
BraA08t34455Z Brassica rapa HOM05D008719 ORTHO05D010898 6.6e-18 95.1 245 40.4
BcaC01g00117 Brassica carinata HOM05D008719 ORTHO05D010898 8.7e-18 94.7 239 38.5
C03p75980 Brassica napus HOM05D008719 ORTHO05D010898 5.6e-17 92.0 211 39.8
BolC3t19849H Brassica oleracea HOM05D008719 ORTHO05D010898 1.6e-16 90.5 211 39.3
BcaB03g12165 Brassica carinata HOM05D008719 ORTHO05D010898 2.8e-16 89.7 258 36.8
C07p16190 Brassica napus HOM05D008719 ORTHO05D010898 1.1e-15 87.8 238 37.0
BolC7t42112H Brassica oleracea HOM05D008719 ORTHO05D010898 9.0e-15 84.7 184 40.2
BraA07t28855Z Brassica rapa HOM05D008719 ORTHO05D010898 9.9e-14 81.3 256 34.0
BcaB07g32545 Brassica carinata HOM05D008719 ORTHO05D010898 1.3e-13 80.9 246 37.0
A07p10610 Brassica napus HOM05D008719 ORTHO05D010898 1.1e-12 77.8 241 34.4
C05p28330 Brassica napus HOM05D008719 ORTHO05D010898 3.5e-11 72.8 222 33.8
BcaC05g26977 Brassica carinata HOM05D008719 ORTHO05D010898 7.9e-11 71.6 222 33.3
BolC5t31555H Brassica oleracea HOM05D008719 ORTHO05D010898 7.9e-11 71.6 222 33.3
A03p19070 Brassica napus HOM05D008719 ORTHO05D010898 6.7e-10 68.6 81 59.3
BraA03t11165Z Brassica rapa HOM05D008719 ORTHO05D010898 6.7e-10 68.6 81 59.3
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 5.3e-07 58.9 206 30.6
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 9.0e-07 58.2 65 52.3
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 9.0e-07 58.2 53 56.6
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 9.9e-06 54.7 103 41.7


User provided reference genes

Program Settings