Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 1.5e-55 219.2 99 100.0
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 1.4e-53 212.6 99 97.0
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 1.4e-53 212.6 99 97.0
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 1.4e-53 212.6 99 97.0
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 2.0e-52 208.8 99 96.0
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 9.7e-52 206.5 99 93.9
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 6.3e-51 203.8 99 93.9
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 2.3e-45 185.3 99 86.9
BraSC36t46093Z Brassica rapa HOM05D003591 ORTHO05D015527 5.2e-29 131.0 99 67.7
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-20 102.4 48 97.9
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 7.5e-20 100.5 48 95.8
A06p24470 Brassica napus HOM05D003591 ORTHO05D015527 9.8e-20 100.1 102 56.9
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 5.0e-16 87.8 52 69.2
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 1.9e-15 85.9 52 71.2
BcaB04g17007 Brassica carinata HOM05D003591 ORTHO05D015462 4.3e-15 84.7 52 71.2
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 4.3e-15 84.7 43 79.1
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 3.6e-14 81.6 52 63.5
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 3.6e-14 81.6 52 65.4
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 8.1e-14 80.5 48 79.2
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 4.0e-13 78.2 48 79.2
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 2.2e-11 72.4 43 67.4
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-11 71.6 48 68.8
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-11 71.2 48 68.8
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 6.4e-11 70.9 51 66.7
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 1.1e-10 70.1 48 68.8
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-10 70.1 48 68.8
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-10 69.7 48 68.8
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 3.2e-10 68.6 48 66.7
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 3.2e-10 68.6 48 66.7
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 4.1e-10 68.2 48 64.6
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 5.4e-10 67.8 48 68.8
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 5.4e-10 67.8 48 68.8
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 9.2e-10 67.0 48 68.8
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 9.2e-10 67.0 48 64.6
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 9.2e-10 67.0 47 68.1
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 9.2e-10 67.0 48 64.6
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 9.2e-10 67.0 48 64.6
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-09 66.6 48 68.8
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.2e-09 66.6 48 64.6
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 1.6e-09 66.2 48 66.7
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-09 66.2 48 66.7
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-09 66.2 48 62.5
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 2.7e-09 65.5 48 62.5
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 2.7e-09 65.5 87 42.5
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-09 65.5 48 62.5
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 2.7e-09 65.5 48 62.5
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 3.5e-09 65.1 48 66.7
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 66.7
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 4.6e-09 64.7 48 62.5
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 4.6e-09 64.7 48 62.5
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-09 64.3 48 68.8
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 6.0e-09 64.3 48 62.5
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-09 64.3 48 62.5
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 6.0e-09 64.3 48 62.5
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 6.0e-09 64.3 48 62.5
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 6.0e-09 64.3 48 62.5
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 7.8e-09 63.9 48 60.4
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 7.8e-09 63.9 48 66.7
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 7.8e-09 63.9 48 62.5
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 7.8e-09 63.9 48 60.4
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-08 63.5 48 62.5
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 1.0e-08 63.5 48 60.4
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 58.3
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 1.3e-08 63.2 48 60.4
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-08 62.8 47 63.8
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-08 62.8 48 58.3
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-08 62.8 48 60.4
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 2.3e-08 62.4 47 63.8
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 2.3e-08 62.4 48 60.4
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-08 62.0 48 64.6
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 3.9e-08 61.6 42 71.4
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 3.9e-08 61.6 48 60.4
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 58.3
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 3.9e-08 61.6 48 60.4
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 5.1e-08 61.2 48 58.3
BraSC39t46198Z Brassica rapa HOM05D003591 ORTHO05D108568 5.1e-08 61.2 26 100.0
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 6.6e-08 60.8 48 60.4
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 8.6e-08 60.5 48 60.4
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 8.6e-08 60.5 47 61.7
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 8.6e-08 60.5 47 61.7
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 8.6e-08 60.5 48 60.4
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-07 60.1 48 60.4
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-07 59.7 48 60.4
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 1.5e-07 59.7 48 60.4
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 1.5e-07 59.7 48 58.3
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 1.9e-07 59.3 44 63.6
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-07 59.3 44 63.6
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-07 59.3 44 63.6
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-07 59.3 44 63.6
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 1.9e-07 59.3 44 63.6
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 1.9e-07 59.3 44 63.6
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 1.9e-07 59.3 44 63.6
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 2.5e-07 58.9 44 61.4
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-07 58.9 48 62.5
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-07 58.5 72 44.4
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 3.3e-07 58.5 48 58.3
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 4.3e-07 58.2 48 58.3
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 5.6e-07 57.8 48 58.3
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 5.6e-07 57.8 48 58.3
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 5.6e-07 57.8 48 58.3
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 9.5e-07 57.0 41 68.3
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 9.5e-07 57.0 48 58.3
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-06 56.2 48 58.3
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 2.1e-06 55.8 41 65.9
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 2.8e-06 55.5 48 58.3
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 4.7e-06 54.7 40 57.5
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 4.7e-06 54.7 41 56.1
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 4.7e-06 54.7 40 57.5
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 4.7e-06 54.7 40 57.5
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 4.7e-06 54.7 40 57.5


User provided reference genes

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