Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p13010 Brassica napus HOM05D002759 ORTHO05D003290 7.9e-73 276.9 134 100.0
C04p13060 Brassica napus HOM05D002759 ORTHO05D003290 7.9e-73 276.9 134 100.0
C04p12980 Brassica napus HOM05D002759 ORTHO05D003290 8.2e-70 266.9 132 96.2
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 5.3e-61 237.7 118 96.6
C04p13080 Brassica napus HOM05D002759 ORTHO05D003290 5.3e-61 237.7 118 96.6
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 1.2e-60 236.5 118 95.8
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 6.8e-56 220.7 118 89.8
BolC4t22359H Brassica oleracea HOM05D002759 ORTHO05D003290 2.6e-55 218.8 119 89.9
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 2.4e-53 212.2 117 86.3
CARHR254490 Cardamine hirsuta HOM05D002759 ORTHO05D003290 4.6e-36 154.8 110 68.2
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 5.6e-34 147.9 101 71.3
unitig_26.g9017 Utricularia gibba HOM05D002759 ORTHO05D003290 6.6e-27 124.4 129 47.3
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 6.8e-24 114.4 132 47.0
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.5e-23 113.2 175 38.3
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 2.0e-23 112.8 166 41.0
MSTRG.16534 Avicennia marina HOM05D002759 ORTHO05D003290 2.0e-23 112.8 134 46.3
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 2.0e-23 112.8 171 38.6
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 2.0e-23 112.8 171 38.6
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.6e-23 112.5 169 39.6
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 3.4e-23 112.1 172 39.5
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 5.8e-23 111.3 126 46.0
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 5.8e-23 111.3 169 38.5
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 9.8e-23 110.5 171 39.2
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 9.8e-23 110.5 171 39.2
FvH4_5g29930 Fragaria vesca HOM05D002759 ORTHO05D003290 1.7e-22 109.8 128 46.1
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 2.9e-22 109.0 169 39.1
CARHR230000 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.9e-22 109.0 169 38.5
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 3.7e-22 108.6 127 45.7
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.7e-22 108.6 127 45.7
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.7e-22 108.6 127 45.7
Oeu037466.1 Olea europaea HOM05D002759 ORTHO05D003290 3.7e-22 108.6 134 46.3
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 4.9e-22 108.2 137 43.1
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 6.4e-22 107.8 173 38.2
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 6.4e-22 107.8 133 45.1
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 8.3e-22 107.5 172 36.6
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 1.1e-21 107.1 170 38.2
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.4e-21 106.7 172 36.6
CARHR073260 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.9e-21 106.3 169 37.9
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 7.1e-21 104.4 164 38.4
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-20 103.6 172 35.5
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 1.2e-20 103.6 172 35.5
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 2.7e-20 102.4 160 37.5
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 3.5e-20 102.1 159 36.5
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 4.6e-20 101.7 153 41.2
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 4.6e-20 101.7 165 37.6
FAN04G1156 Fragaria x ananassa HOM05D002759 ORTHO05D003290 7.8e-20 100.9 128 43.0
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 7.8e-20 100.9 123 42.3
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 7.8e-20 100.9 159 39.0
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.0e-19 100.5 158 36.7
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 1.0e-19 100.5 160 36.2
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.0e-19 100.5 160 36.2
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.0e-19 100.5 164 39.0
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 1.0e-19 100.5 159 39.0
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.3e-19 100.1 167 37.7
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 1.3e-19 100.1 161 37.3
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 1.3e-19 100.1 161 36.0
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 1.7e-19 99.8 162 37.0
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 1.7e-19 99.8 160 37.5
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 2.3e-19 99.4 125 39.2
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 2.3e-19 99.4 158 36.7
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.3e-19 99.4 162 35.2
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.3e-19 99.4 162 35.2
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 2.3e-19 99.4 161 37.3
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 5.1e-19 98.2 162 35.8
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 6.6e-19 97.8 160 35.6
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 6.6e-19 97.8 166 37.3
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 6.6e-19 97.8 162 35.2
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 6.6e-19 97.8 156 37.8
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 8.6e-19 97.4 157 36.3
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 8.6e-19 97.4 162 35.8
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 1.5e-18 96.7 160 35.6
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.5e-18 96.7 161 35.4
Lj9A311T56 Lonicera japonica HOM05D002759 ORTHO05D003290 3.3e-18 95.5 164 37.2
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 3.3e-18 95.5 162 35.2
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 5.6e-18 94.7 114 45.6
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 5.6e-18 94.7 161 34.8
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 7.3e-18 94.4 145 37.2
MD15G1419000 Malus domestica HOM05D002759 ORTHO05D003290 7.3e-18 94.4 162 35.2
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 7.3e-18 94.4 163 36.2
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 7.3e-18 94.4 161 36.6
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 9.5e-18 94.0 159 35.2
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 9.5e-18 94.0 162 34.6
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.2e-17 93.6 162 34.6
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.2e-17 93.6 161 35.4
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 1.2e-17 93.6 163 34.4
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 1.2e-17 93.6 162 34.6
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 1.6e-17 93.2 165 36.4
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 1.6e-17 93.2 164 34.1
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 2.1e-17 92.8 158 34.2
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 3.6e-17 92.0 162 37.0
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 3.6e-17 92.0 161 34.8
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 3.6e-17 92.0 164 33.5
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 3.6e-17 92.0 163 34.4
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 6.2e-17 91.3 162 37.0
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 8.1e-17 90.9 160 35.0
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.4e-16 90.1 162 34.6
Ah.07g205400 Amaranthus hybridus HOM05D002759 ORTHO05D003290 1.8e-16 89.7 161 33.5
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 1.8e-16 89.7 160 33.8
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 1.8e-16 89.7 165 36.4
Actinidia00221 Actinidia chinensis HOM05D002759 ORTHO05D003290 2.3e-16 89.4 154 37.7
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 4.0e-16 88.6 156 35.3
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 4.0e-16 88.6 153 32.7
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 6.8e-16 87.8 163 34.4
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 6.8e-16 87.8 165 33.3
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 6.8e-16 87.8 165 35.2
Gohir.A01G176651 Gossypium hirsutum HOM05D002759 ORTHO05D003290 8.9e-16 87.4 161 32.3
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 8.9e-16 87.4 161 32.3
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 8.9e-16 87.4 161 32.3
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 8.9e-16 87.4 172 32.0
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 1.5e-15 86.7 134 39.6
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 1.5e-15 86.7 163 33.7
ATR0661G182 Amborella trichopoda HOM05D002759 ORTHO05D003290 2.0e-15 86.3 162 31.5
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 7.6e-15 84.3 158 33.5
Aqoxy3G00697 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.3e-14 83.6 152 35.5
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.7e-14 83.2 161 32.9
Os02g0770700 Oryza sativa ssp. japonica HOM05D002759 ORTHO05D003290 2.9e-14 82.4 162 30.9
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 8.4e-14 80.9 151 33.8
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 8.4e-14 80.9 72 54.2
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.1e-13 80.5 74 50.0
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 2.4e-13 79.3 72 51.4
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 3.2e-13 79.0 72 51.4
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 7.1e-13 77.8 72 50.0
Ca_21888_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 2.1e-12 76.3 123 36.6
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 6.0e-12 74.7 164 30.5
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 7.8e-12 74.3 196 28.6
vmacro01782 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 7.8e-12 74.3 75 45.3
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.0e-11 73.9 72 47.2
Cre01.g029200 Chlamydomonas reinhardtii HOM05D002759 ORTHO05D003290 1.7e-11 73.2 125 32.8
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 1.7e-11 73.2 155 31.0
SEGI_36881 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 5.1e-11 71.6 74 48.6
SEGI_09006 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.1e-10 70.5 74 48.6
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 1.5e-10 70.1 168 28.6
CBR_g18638 Chara braunii HOM05D002759 ORTHO05D003290 9.6e-10 67.4 169 28.4
Cpa.g.sc148.32 Carica papaya HOM05D002759 ORTHO05D003290 1.4e-08 63.5 71 40.8
COL.COLO4_38329 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.4e-08 63.5 63 49.2
Atru.chr6.1022 Acer truncatum HOM05D002759 ORTHO05D003290 6.8e-08 61.2 138 34.1
Oeu043988.1 Olea europaea HOM05D002759 ORTHO05D003290 1.5e-07 60.1 62 43.5
COL.COLO4_16679 Corchorus olitorius HOM05D002759 ORTHO05D003290 7.6e-07 57.8 107 35.5
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 8.4e-06 54.3 52 48.1


User provided reference genes

Program Settings