Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p13020 Brassica napus HOM05D000313 ORTHO05D101481 5.0e-16 86.7 44 100.0
C04p13070 Brassica napus HOM05D000313 ORTHO05D099178 5.0e-16 86.7 44 100.0
BolC2t11634H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-09 65.5 58 67.2
C04p28450 Brassica napus HOM05D000313 ORTHO05D028035 1.6e-09 65.1 53 71.7
C04p28460 Brassica napus HOM05D000313 ORTHO05D028035 1.6e-09 65.1 53 71.7
C04p28470 Brassica napus HOM05D000313 ORTHO05D028035 1.6e-09 65.1 53 71.7
BolC4t24392H Brassica oleracea HOM05D000313 ORTHO05D028035 1.6e-09 65.1 53 71.7
BolC6t36640H Brassica oleracea HOM05D000313 ORTHO05D013793 4.5e-09 63.5 42 78.6
C07p40620 Brassica napus HOM05D000313 ORTHO05D027753 7.7e-09 62.8 42 78.6
C08p45950 Brassica napus HOM05D000313 ORTHO05D013793 7.7e-09 62.8 42 78.6
BolC1t03941H Brassica oleracea HOM05D000313 ORTHO05D003548 7.7e-09 62.8 42 78.6
BolC2t10509H Brassica oleracea HOM05D000313 ORTHO05D013793 7.7e-09 62.8 42 78.6
BolC2t11731H Brassica oleracea HOM05D000313 ORTHO05D013793 7.7e-09 62.8 42 76.2
BolC3t15908H Brassica oleracea HOM05D000313 ORTHO05D003548 7.7e-09 62.8 42 78.6
BolC9t54710H Brassica oleracea HOM05D000313 ORTHO05D027753 7.7e-09 62.8 42 78.6
BolC2t06935H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-08 62.4 53 69.8
BolC5t33059H Brassica oleracea HOM05D000313 ORTHO05D013793 1.0e-08 62.4 42 78.6
C06p03280 Brassica napus HOM05D000313 ORTHO05D013793 1.7e-08 61.6 42 76.2
BcaC07g37624 Brassica carinata HOM05D000313 ORTHO05D027753 2.9e-08 60.8 42 76.2
BolC9t56757H Brassica oleracea HOM05D000313 ORTHO05D013793 3.8e-08 60.5 42 73.8
BolC9t55229H Brassica oleracea HOM05D000313 ORTHO05D013793 6.5e-08 59.7 42 76.2
BolC1t01376H Brassica oleracea HOM05D000313 ORTHO05D013793 1.5e-07 58.5 42 73.8
C03p26850 Brassica napus HOM05D001215 ORTHO05D024523 1.9e-07 58.2 42 71.4
BcaB07g33017 Brassica carinata HOM05D001829 ORTHO05D003548 5.5e-07 56.6 39 74.4
BcaC07g37740 Brassica carinata HOM05D000313 ORTHO05D003548 5.5e-07 56.6 39 74.4
BolC4t25503H Brassica oleracea HOM05D000313 ORTHO05D013793 7.2e-07 56.2 37 78.4
BolC7t41253H Brassica oleracea HOM05D000313 ORTHO05D027753 7.2e-07 56.2 42 71.4
C09p55330 Brassica napus HOM05D025000 ORTHO05D003548 1.2e-06 55.5 42 71.4
BolC8t51190H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-06 54.3 42 69.0
BcaC08g43827 Brassica carinata HOM05D001829 ORTHO05D003548 6.1e-06 53.1 34 76.5
C06p12110 Brassica napus HOM05D001829 ORTHO05D003548 6.1e-06 53.1 34 76.5
BolC6t36349H Brassica oleracea HOM05D001829 ORTHO05D003548 6.1e-06 53.1 34 76.5
A09p32580 Brassica napus HOM05D001829 ORTHO05D003548 8.0e-06 52.8 33 78.8
BraA09t38799Z Brassica rapa HOM05D001829 ORTHO05D003548 8.0e-06 52.8 33 78.8


User provided reference genes

Program Settings