Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p12030 Brassica napus HOM05D002436 ORTHO05D040030 1.0e-104 383.6 226 100.0
BcaC02g11718 Brassica carinata HOM05D002436 ORTHO05D040030 5.8e-68 261.5 197 87.8
Solyc08g008510.3 Solanum lycopersicum HOM05D002436 ORTHO05D002754 4.7e-17 92.4 100 73.0
Sopen08g004360 Solanum pennellii HOM05D002436 ORTHO05D002754 4.7e-17 92.4 100 73.0
PGSC0003DMG400005799 Solanum tuberosum HOM05D002436 ORTHO05D002754 4.7e-17 92.4 100 75.0
Dinv12194 Davidia involucrata HOM05D002436 ORTHO05D002754 1.0e-16 91.3 100 73.0
HanXRQChr07g0189261 Helianthus annuus HOM05D002436 ORTHO05D002754 2.3e-16 90.1 100 70.0
Dinv02418 Davidia involucrata HOM05D002436 ORTHO05D002754 5.2e-16 89.0 97 74.2
SalBow6G0415 Salvia bowleyana HOM05D002436 ORTHO05D002754 6.8e-16 88.6 97 74.2
Manes.01G052108 Manihot esculenta HOM05D002436 ORTHO05D002754 8.8e-16 88.2 97 74.2
ECA233G1501 Erigeron canadensis HOM05D002436 ORTHO05D002754 3.4e-15 86.3 100 69.0
FAN08G1669 Fragaria x ananassa HOM05D002436 ORTHO05D002754 5.7e-15 85.5 96 71.9
MBI04_g06930_MAGBIO Magnolia biondii HOM05D002436 ORTHO05D002754 5.7e-15 85.5 122 61.5
Lj2A158T86 Lonicera japonica HOM05D002436 ORTHO05D002754 9.8e-15 84.7 97 72.2
CANSAT21G2172 Cannabis sativa HOM05D002436 ORTHO05D002754 1.3e-14 84.3 100 70.0
Aa31LG6G7270 Aethionema arabicum HOM05D002436 ORTHO05D002754 1.7e-14 84.0 100 70.0
Migut.F01458 Erythranthe guttata HOM05D002436 ORTHO05D002754 1.7e-14 84.0 100 69.0
SGA_v2.0_scaffold2G01023 Striga asiatica HOM05D002436 ORTHO05D002754 2.8e-14 83.2 97 73.2
vmacro11516 Vaccinium macrocarpon HOM05D002436 ORTHO05D002754 2.8e-14 83.2 100 71.0
SGA_v2.0_scaffold221G42689 Striga asiatica HOM05D002436 ORTHO05D002754 4.8e-14 82.4 97 71.1
AL6G44840 Arabidopsis lyrata HOM05D002436 ORTHO05D002754 8.3e-14 81.6 122 59.8
CSS0024505 Camellia sinensis var. sinensis HOM05D002436 ORTHO05D002754 1.8e-13 80.5 97 66.0
PSO063G1665 Papaver somniferum HOM05D002436 ORTHO05D002754 2.4e-13 80.1 100 68.0
Oeu041380.1 Olea europaea HOM05D000295 ORTHO05D002754 5.4e-13 79.0 100 68.0
Ciclev10020047m.g Citrus clementina HOM05D002436 ORTHO05D002754 7.0e-13 78.6 122 58.2
Cc08_g16590 Coffea canephora HOM05D002436 ORTHO05D002754 1.2e-12 77.8 97 68.0
QL02p029000 Quercus lobata HOM05D002436 ORTHO05D002754 1.2e-12 77.8 97 69.1
TAR374G1290 Trochodendron aralioides HOM05D002436 ORTHO05D002754 2.7e-12 76.6 97 69.1
TAR629G0988 Trochodendron aralioides HOM05D002436 ORTHO05D002754 2.7e-12 76.6 122 52.5
AT4G10790 Arabidopsis thaliana HOM05D002436 ORTHO05D002754 3.5e-12 76.3 122 59.8
HanXRQChr13g0415531 Helianthus annuus HOM05D002436 ORTHO05D002754 4.5e-12 75.9 117 56.4
C05p25750 Brassica napus HOM05D027564 ORTHO05D102904 7.7e-12 75.1 48 91.7
CDE12G0294 Ceratophyllum demersum HOM05D002436 ORTHO05D002754 7.7e-12 75.1 100 56.0
DCAR_006530 Daucus carota HOM05D002436 ORTHO05D002754 7.7e-12 75.1 97 63.9
Lsat_1_v5_gn_6_82361 Lactuca sativa HOM05D002436 ORTHO05D002754 1.3e-11 74.3 97 67.0
Thhalv10028607m.g Eutrema salsugineum HOM05D002436 ORTHO05D002754 1.7e-11 73.9 100 68.0
Carub.0007s2248 Capsella rubella HOM05D018338 ORTHO05D020026 2.2e-11 73.6 106 46.2
Nitab4.5_0000673g0100 Nicotiana tabacum HOM05D002436 ORTHO05D002754 2.9e-11 73.2 100 64.0
Nitab4.5_0005042g0020 Nicotiana tabacum HOM05D002436 ORTHO05D002754 3.8e-11 72.8 97 67.0
BcaC04g20560 Brassica carinata HOM05D002436 ORTHO05D002754 5.0e-11 72.4 48 87.5
C09p42120 Brassica napus HOM05D002436 ORTHO05D002754 5.0e-11 72.4 48 87.5
CSS0026665 Camellia sinensis var. sinensis HOM05D002436 ORTHO05D002754 1.1e-10 71.2 97 59.8
arahy.Tifrunner.gnm1.ann1.9SA85P Arachis hypogaea HOM05D002436 ORTHO05D002754 1.5e-10 70.9 97 62.9
arahy.Tifrunner.gnm1.ann1.EIUR6S Arachis hypogaea HOM05D002436 ORTHO05D002754 2.5e-10 70.1 97 63.9
Lalb_Chr21g0311661 Lupinus albus HOM05D002436 ORTHO05D002754 2.5e-10 70.1 119 56.3
BcaC04g21075 Brassica carinata HOM05D002436 ORTHO05D002754 3.2e-10 69.7 100 66.0
C09p36010 Brassica napus HOM05D002436 ORTHO05D002754 3.2e-10 69.7 100 66.0
BolC9t56435H Brassica oleracea HOM05D002436 ORTHO05D002754 3.2e-10 69.7 100 66.0
MD06G1114700 Malus domestica HOM05D002436 ORTHO05D002754 4.2e-10 69.3 96 66.7
Medtr1g077740 Medicago truncatula HOM05D002436 ORTHO05D002754 4.2e-10 69.3 122 54.1
Actinidia27295 Actinidia chinensis HOM05D002436 ORTHO05D002754 5.5e-10 68.9 122 58.2
CARHR255810 Cardamine hirsuta HOM05D002436 ORTHO05D002754 7.2e-10 68.6 122 58.2
BcaB05g23885 Brassica carinata HOM05D002436 ORTHO05D002754 9.4e-10 68.2 100 66.0
A09p28440 Brassica napus HOM05D002436 ORTHO05D002754 9.4e-10 68.2 100 66.0
BraA09t38409Z Brassica rapa HOM05D002436 ORTHO05D002754 9.4e-10 68.2 100 66.0
COL.COLO4_10773 Corchorus olitorius HOM05D002436 ORTHO05D002754 9.4e-10 68.2 97 64.9
Nitab4.5_0001962g0050 Nicotiana tabacum HOM05D002436 ORTHO05D002754 9.4e-10 68.2 100 64.0
A03p29290 Brassica napus HOM05D002436 ORTHO05D002754 1.2e-09 67.8 100 65.0
C03p35190 Brassica napus HOM05D002436 ORTHO05D002754 1.2e-09 67.8 100 65.0
BolC3t15830H Brassica oleracea HOM05D002436 ORTHO05D002754 1.2e-09 67.8 100 65.0
BraA03t12125Z Brassica rapa HOM05D002436 ORTHO05D002754 1.2e-09 67.8 100 65.0
FAN13G1750 Fragaria x ananassa HOM05D002436 ORTHO05D002754 1.2e-09 67.8 96 64.6
CSS0046293 Camellia sinensis var. sinensis HOM05D002436 ORTHO05D002754 2.7e-09 66.6 88 61.4
Lj5g0019172 Lotus japonicus HOM05D002436 ORTHO05D002754 2.7e-09 66.6 73 57.5
VMungo0720G0667 Vigna mungo HOM05D002436 ORTHO05D002754 2.7e-09 66.6 122 50.8
BcaC01g04662 Brassica carinata HOM05D002436 ORTHO05D002754 4.7e-09 65.9 100 64.0
ClCG01G001610 Citrullus lanatus HOM05D002436 ORTHO05D002754 6.1e-09 65.5 122 54.1
Potri.001G085600 Populus trichocarpa HOM05D002436 ORTHO05D002754 6.1e-09 65.5 122 55.7
Actinidia04163 Actinidia chinensis HOM05D002436 ORTHO05D002754 8.0e-09 65.1 122 55.7
Aqoxy7G00039 Aquilegia oxysepala HOM05D002436 ORTHO05D002754 8.0e-09 65.1 100 61.0
Sp6g06710 Schrenkiella parvula HOM05D002436 ORTHO05D002754 1.0e-08 64.7 100 63.0
BcaB01g01515 Brassica carinata HOM05D002436 ORTHO05D002754 1.4e-08 64.3 100 64.0
BcaB01g02738 Brassica carinata HOM05D002436 ORTHO05D002754 1.8e-08 63.9 100 64.0
Carub.0006s2956 Capsella rubella HOM05D002436 ORTHO05D002754 2.3e-08 63.5 119 57.1
Sabra01G0062000 Salix brachista HOM05D002436 ORTHO05D002754 2.3e-08 63.5 100 57.0
THA.LOC104815202 Tarenaya hassleriana HOM05D002436 ORTHO05D002754 2.3e-08 63.5 97 64.9
BcaC01g01498 Brassica carinata HOM05D018338 ORTHO05D020026 4.0e-08 62.8 73 56.2
MSTRG.2012 Avicennia marina HOM05D002436 ORTHO05D002754 5.2e-08 62.4 97 54.6
Cpa.g.sc175.7 Carica papaya HOM05D002436 ORTHO05D002754 5.2e-08 62.4 97 62.9
ATR0772G173 Amborella trichopoda HOM05D002436 ORTHO05D002754 6.8e-08 62.0 97 53.6
GSVIVG01019629001 Vitis vinifera HOM05D002436 ORTHO05D002754 6.8e-08 62.0 97 62.9
Gohir.A02G097400 Gossypium hirsutum HOM05D002436 ORTHO05D002754 8.8e-08 61.6 97 61.9
Gorai.003G075800 Gossypium raimondii HOM05D002436 ORTHO05D002754 8.8e-08 61.6 97 61.9
CAN.G567.74 Capsicum annuum HOM05D002436 ORTHO05D002754 1.2e-07 61.2 97 61.9
Cfa011942 Carpinus fangiana HOM05D002436 ORTHO05D002754 1.2e-07 61.2 97 41.2
Peaxi162Scf00102g01851 Petunia axillaris HOM05D002436 ORTHO05D002754 1.2e-07 61.2 100 61.0
Hund11359 Selenicereus undatus HOM05D002436 ORTHO05D002754 1.2e-07 61.2 122 54.9
RcHm_v2.0_Chr7g0186581 Rosa chinensis HOM05D002436 ORTHO05D002754 1.5e-07 60.8 109 56.0
Thhalv10025495m.g Eutrema salsugineum HOM05D002436 ORTHO05D002754 2.0e-07 60.5 119 54.6
Phvul.L005701 Phaseolus vulgaris HOM05D002436 ORTHO05D002754 2.0e-07 60.5 122 52.5
Gohir.A12G239000 Gossypium hirsutum HOM05D002436 ORTHO05D002754 2.6e-07 60.1 97 60.8
Gohir.D03G086400 Gossypium hirsutum HOM05D002436 ORTHO05D002754 2.6e-07 60.1 97 60.8
Gohir.D12G240200 Gossypium hirsutum HOM05D002436 ORTHO05D002754 2.6e-07 60.1 97 60.8
Gorai.008G257200 Gossypium raimondii HOM05D002436 ORTHO05D002754 2.6e-07 60.1 97 60.8
Nitab4.5_0002728g0040 Nicotiana tabacum HOM05D002436 ORTHO05D002754 2.6e-07 60.1 97 60.8
Duzib084G1267 Durio zibethinus HOM05D002436 ORTHO05D002754 4.4e-07 59.3 97 60.8
FAN04G0034 Fragaria x ananassa HOM05D002436 ORTHO05D002754 4.4e-07 59.3 96 62.5
Thecc.03G223600 Theobroma cacao HOM05D002436 ORTHO05D002754 4.4e-07 59.3 97 59.8
Haze_09145 Corylus avellana HOM05D002436 ORTHO05D002754 7.5e-07 58.5 97 41.2
BcaB02g07175 Brassica carinata HOM05D002436 ORTHO05D002754 9.8e-07 58.2 108 59.3
Lalb_Chr02g0149641 Lupinus albus HOM05D002436 ORTHO05D002754 9.8e-07 58.2 122 50.8
A05p23200 Brassica napus HOM05D006212 ORTHO05D008245 1.3e-06 57.8 94 45.7
BraA05t21187Z Brassica rapa HOM05D006212 ORTHO05D008245 1.3e-06 57.8 94 45.7
FvH4_5g11270 Fragaria vesca HOM05D002436 ORTHO05D002754 1.3e-06 57.8 96 61.5
FAN18G2378 Fragaria x ananassa HOM05D002436 ORTHO05D002754 1.3e-06 57.8 96 61.5
FAN18G3358 Fragaria x ananassa HOM05D002436 ORTHO05D002754 1.3e-06 57.8 96 61.5
Nn3g18914 Nelumbo nucifera HOM05D002436 ORTHO05D002754 1.3e-06 57.8 106 55.7
Psat6g053480 Pisum sativum HOM05D002436 ORTHO05D002754 2.2e-06 57.0 122 46.7
Sc01g0010540 Simmondsia chinensis HOM05D002436 ORTHO05D002754 2.2e-06 57.0 97 60.8
CiPaw.12G078800 Carya illinoinensis HOM05D002436 ORTHO05D002754 2.8e-06 56.6 122 51.6
Duzib205G1410 Durio zibethinus HOM05D002436 ORTHO05D002754 2.8e-06 56.6 122 50.8
Ah.12g053050 Amaranthus hybridus HOM05D002436 ORTHO05D002754 3.7e-06 56.2 97 60.8
EL10Ac5g12460 Beta vulgaris HOM05D002436 ORTHO05D002754 3.7e-06 56.2 97 60.8
Lsat_1_v5_gn_6_9060 Lactuca sativa HOM05D002436 ORTHO05D002754 3.7e-06 56.2 100 58.0
MD14G1136100 Malus domestica HOM05D002436 ORTHO05D002754 4.9e-06 55.8 101 59.4
TPR.G34812 Trifolium pratense HOM05D002436 ORTHO05D002754 4.9e-06 55.8 122 48.4
Ca_09935_v3 Cicer arietinum L. HOM05D002436 ORTHO05D002754 6.3e-06 55.5 122 50.8
Ca_09945_v3 Cicer arietinum L. HOM05D002436 ORTHO05D002754 6.3e-06 55.5 122 50.8
Eucgr.D01693 Eucalyptus grandis HOM05D002436 ORTHO05D002754 6.3e-06 55.5 97 59.8
Sed0009775 Sechium edule HOM05D002436 ORTHO05D002754 6.3e-06 55.5 122 50.8
Solyc08g082970.4 Solanum lycopersicum HOM05D002436 ORTHO05D002754 6.3e-06 55.5 97 54.6
A02p16340 Brassica napus HOM05D000629 ORTHO05D000576 8.3e-06 55.1 39 79.5
BraA02t06691Z Brassica rapa HOM05D000629 ORTHO05D000576 8.3e-06 55.1 39 79.5
Manes.02G004500 Manihot esculenta HOM05D002436 ORTHO05D002754 8.3e-06 55.1 97 58.8


User provided reference genes

Program Settings