Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 4.6e-285 983.8 467 100.0
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 4.6e-285 983.8 467 100.0
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 4.3e-283 977.2 473 98.7
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 4.6e-277 957.2 489 94.3
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 5.6e-275 950.3 492 93.5
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 3.1e-273 944.5 469 95.9
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 9.9e-272 939.5 469 95.1
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 3.0e-268 927.9 494 90.9
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 2.2e-250 868.6 464 86.9
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 2.0e-240 835.5 463 83.4
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 4.2e-238 827.8 445 87.6
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 1.2e-237 826.2 463 82.9
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 1.3e-231 806.2 465 81.9
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 5.0e-199 698.0 465 70.1
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 2.6e-179 632.5 350 82.3
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 3.5e-176 622.1 461 61.0
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.5e-174 616.7 462 60.6
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 3.4e-171 605.5 458 60.3
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 8.4e-170 600.9 462 57.1
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 2.4e-169 599.4 464 58.2
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 1.0e-167 594.0 468 58.5
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 1.3e-167 593.6 466 58.8
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 6.6e-167 591.3 461 57.9
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 4.3e-166 588.6 461 59.9
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 2.1e-165 586.3 461 58.1
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 3.6e-165 585.5 461 58.6
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.4e-164 583.6 464 57.8
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 1.4e-164 583.6 461 58.4
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 2.4e-164 582.8 464 57.5
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 4.0e-164 582.0 465 57.0
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 4.0e-164 582.0 461 57.0
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 4.4e-163 578.6 464 56.9
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 5.8e-163 578.2 461 57.7
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 1.7e-162 576.6 463 59.0
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 2.2e-162 576.2 461 58.8
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 2.2e-162 576.2 459 57.5
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 8.4e-162 574.3 462 57.4
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 8.4e-162 574.3 462 56.7
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 8.4e-162 574.3 447 57.9
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 3.2e-161 572.4 475 56.4
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 9.3e-161 570.9 462 55.8
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 9.3e-161 570.9 477 55.3
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.2e-160 570.5 475 56.6
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 2.7e-160 569.3 475 56.2
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 4.6e-160 568.5 461 55.1
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 7.8e-160 567.8 443 58.9
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.7e-159 566.6 462 55.2
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 2.3e-159 566.2 461 56.4
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 6.6e-159 564.7 461 56.0
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 7.3e-158 561.2 462 55.4
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 1.3e-157 560.5 472 55.3
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 3.6e-157 558.9 435 58.2
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 6.2e-157 558.1 468 55.8
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 3.1e-156 555.8 461 55.3
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 9.0e-156 554.3 495 53.5
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 1.5e-155 553.5 461 55.1
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 3.2e-153 545.8 463 54.4
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 4.3e-150 535.4 493 51.3
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 4.8e-149 531.9 471 54.6
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.4e-148 530.4 464 53.7
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 3.9e-143 512.3 420 56.7
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 8.7e-143 511.1 447 54.4
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 1.3e-138 497.3 421 54.6
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 6.5e-138 495.0 409 56.0
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 9.3e-137 491.1 394 56.3
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 1.6e-133 480.3 353 60.9
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 2.2e-133 479.9 474 48.9
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 2.6e-131 473.0 340 60.3
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 3.4e-131 472.6 579 43.4
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 1.1e-129 467.6 379 56.7
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 9.4e-129 464.5 509 45.6
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 3.3e-126 456.1 516 44.8
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 4.3e-126 455.7 538 42.9
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 2.8e-125 453.0 462 48.7
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 1.8e-124 450.3 393 52.2
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 2.2e-122 443.4 346 58.7
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 8.5e-122 441.4 261 80.1
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 4.2e-121 439.1 380 56.3
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 3.6e-120 436.0 550 42.7
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 3.0e-119 433.0 452 46.2
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 8.8e-119 431.4 373 55.8
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 1.5e-115 420.6 398 50.5
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 1.3e-114 417.5 395 50.6
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 7.0e-108 395.2 345 52.5
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 9.4e-105 384.8 461 44.3
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 2.7e-104 383.3 457 44.0
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 2.3e-103 380.2 378 48.1
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 7.2e-97 358.6 414 43.0
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 2.2e-85 320.5 417 41.5
Haze_25433 Corylus avellana HOM05D006254 ORTHO05D007409 3.3e-81 306.6 245 58.8
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 4.4e-78 296.2 198 64.6
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 5.8e-78 295.8 459 38.1
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 2.9e-77 293.5 303 49.5
Haze_25436 Corylus avellana HOM05D006254 ORTHO05D007409 7.8e-75 285.4 211 61.6
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 5.6e-73 279.3 219 56.6
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 1.3e-69 268.1 264 49.6
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 2.2e-69 267.3 260 49.6
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 8.3e-69 265.4 500 34.8
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 3.9e-66 256.5 296 42.9
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 5.1e-66 256.1 169 66.3
Migut.H00787 Erythranthe guttata HOM05D006254 ORTHO05D007409 6.2e-64 249.2 221 51.6
Lj4g0022315 Lotus japonicus HOM05D006254 ORTHO05D007409 4.4e-62 243.0 229 51.5
BolC4t22792H Brassica oleracea HOM05D006254 ORTHO05D007409 1.1e-60 238.4 135 85.9
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 9.6e-57 225.3 514 30.0
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 3.1e-55 220.3 159 61.6
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 2.6e-54 217.2 159 61.0
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 7.1e-52 209.1 438 30.6
SEGI_09568 Sequoiadendron giganteum HOM05D006254 ORTHO05D007409 1.5e-38 164.9 234 37.6
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 1.7e-37 161.4 294 33.0
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 9.3e-36 155.6 203 38.9
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 1.9e-33 147.9 246 32.9
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 4.3e-33 146.7 246 32.9
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 1.5e-30 138.3 90 66.7
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 1.4e-28 131.7 78 73.1
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 1.9e-28 131.3 570 23.5
AL1G53840 Arabidopsis lyrata HOM05D003114 ORTHO05D003519 1.2e-27 128.6 107 65.4
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 1.0e-21 109.0 68 64.7
AagrBONN_evm.TU.Sc2ySwM_228.4094 Anthoceros agrestis HOM05D006254 ORTHO05D007409 1.3e-21 108.6 238 31.1
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 8.4e-21 105.9 89 48.3
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 1.4e-20 105.1 54 92.6
ClCG04G002460 Citrullus lanatus HOM05D006254 ORTHO05D007409 2.5e-20 104.4 103 52.4
MD11G1077000 Malus domestica HOM05D006254 ORTHO05D007409 4.2e-20 103.6 73 58.9
HanXRQChr02g0035161 Helianthus annuus HOM05D006254 ORTHO05D007409 5.5e-20 103.2 108 43.5
Glyma.08G005450 Glycine max HOM05D006254 ORTHO05D007409 3.0e-18 97.4 76 55.3
AagrBONN_evm.TU.Sc2ySwM_340.558 Anthoceros agrestis HOM05D002405 ORTHO05D002483 2.5e-17 94.4 187 30.5
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 8.2e-16 89.4 124 37.9
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 8.2e-16 89.4 67 52.2
PSO170G1462 Papaver somniferum HOM05D006254 ORTHO05D007409 1.1e-15 89.0 102 42.2
HanXRQChr13g0399511 Helianthus annuus HOM05D006254 ORTHO05D007409 2.6e-14 84.3 96 43.8
Os08g0123300 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 2.5e-12 77.8 94 43.6
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea HOM05D006254 ORTHO05D007409 2.3e-10 71.2 83 44.6
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 5.1e-10 70.1 39 71.8


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