Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.6e-64 249.2 119 100.0
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.6e-64 249.2 119 100.0
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.6e-64 249.2 119 100.0
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.6e-64 249.2 119 100.0
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 6.6e-63 243.8 119 98.3
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 6.6e-63 243.8 119 98.3
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-61 239.6 119 95.8
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.2e-61 239.6 119 95.8
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 2.8e-61 238.4 119 95.0
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 2.8e-61 238.4 119 95.0
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 2.8e-61 238.4 119 95.0
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 3.6e-61 238.0 119 95.0
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 8.9e-60 233.4 118 93.2
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 4.4e-59 231.1 119 92.4
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.3e-58 229.6 119 90.8
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 8.4e-58 226.9 117 91.5
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 8.4e-58 226.9 119 90.8
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.4e-57 226.1 119 88.2
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 4.4e-51 204.5 116 81.9
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 1.3e-50 203.0 117 82.1
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.4e-49 199.5 116 77.6
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.9e-49 199.1 117 77.8
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.4e-49 198.7 115 79.1
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 2.4e-49 198.7 116 77.6
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 2.4e-49 198.7 116 77.6
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.4e-49 198.7 117 77.8
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 4.2e-49 198.0 116 76.7
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 9.3e-49 196.8 116 75.0
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 2.1e-48 195.7 116 76.7
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 2.7e-48 195.3 116 78.4
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.7e-48 195.3 116 76.7
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 4.6e-48 194.5 116 77.6
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 4.6e-48 194.5 118 76.3
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 4.6e-48 194.5 116 75.0
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 6.0e-48 194.1 116 75.0
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 6.0e-48 194.1 116 78.4
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 6.0e-48 194.1 116 76.7
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 6.0e-48 194.1 116 76.7
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 6.0e-48 194.1 116 75.9
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 1.0e-47 193.4 116 77.6
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.3e-47 193.0 117 81.2
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 1.3e-47 193.0 117 76.1
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 1.7e-47 192.6 116 75.9
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 2.3e-47 192.2 115 75.7
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 3.0e-47 191.8 119 75.6
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 3.0e-47 191.8 116 75.0
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 3.0e-47 191.8 116 74.1
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 3.0e-47 191.8 116 76.7
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 3.9e-47 191.4 116 75.9
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 5.1e-47 191.0 116 75.0
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 6.6e-47 190.7 116 75.0
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 6.6e-47 190.7 116 75.0
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 1.1e-46 189.9 116 76.7
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 1.5e-46 189.5 116 75.0
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 2.5e-46 188.7 116 75.0
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 2.5e-46 188.7 116 75.0
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 4.3e-46 188.0 116 75.0
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 4.3e-46 188.0 116 75.0
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 4.3e-46 188.0 116 74.1
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 5.6e-46 187.6 116 74.1
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.3e-45 186.4 116 73.3
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 2.1e-45 185.7 116 72.4
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 3.6e-45 184.9 114 75.4
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 4.8e-45 184.5 119 76.5
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 8.1e-45 183.7 117 74.4
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 4.0e-44 181.4 119 73.9
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 6.9e-44 180.6 118 72.9
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 9.0e-44 180.3 116 73.3
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 9.0e-44 180.3 118 71.2
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.2e-43 179.9 123 70.7
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 2.0e-43 179.1 116 72.4
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 5.8e-43 177.6 118 70.3
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.9
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.9
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.9
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.9
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 4.9e-42 174.5 121 68.6
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.4e-41 172.9 118 72.0
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 1.4e-41 172.9 116 71.6
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 1.4e-41 172.9 118 72.0
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 5.4e-41 171.0 121 66.9
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 9.3e-41 170.2 130 63.8
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 4.6e-40 167.9 116 69.8
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 4.6e-40 167.9 116 67.2
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 4.6e-40 167.9 116 68.1
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 3.7e-37 158.3 89 77.5
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 6.2e-37 157.5 119 67.2
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 6.2e-37 157.5 119 67.2
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.8e-36 156.0 99 69.7
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 1.8e-36 156.0 87 79.3
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 1.8e-36 156.0 87 77.0
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 5.3e-36 154.5 87 75.9
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 9.0e-36 153.7 114 63.2
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 2.6e-35 152.1 89 75.3
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 7.6e-35 150.6 87 75.9
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 7.6e-35 150.6 99 72.7
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 1.0e-34 150.2 89 74.2
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.7e-34 149.4 128 60.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 1.1e-33 146.7 87 75.9
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.4e-33 146.4 87 74.7
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 1.6e-32 142.9 87 73.6
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 2.7e-32 142.1 78 80.8
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.1e-30 136.7 89 68.5
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 4.3e-30 134.8 84 72.6
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 9.6e-30 133.7 85 71.8
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 9.6e-30 133.7 84 71.4
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 1.6e-29 132.9 84 72.6
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 1.6e-29 132.9 84 72.6
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 8.2e-29 130.6 72 80.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 5.3e-28 127.9 84 67.9
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 2.6e-27 125.6 96 62.5
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.0e-26 123.6 89 64.0
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 2.9e-26 122.1 98 60.2
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 2.9e-26 122.1 96 63.5
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 6.5e-26 120.9 99 60.6
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 6.5e-18 94.4 63 68.3
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 1.1e-17 93.6 53 77.4
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 4.6e-16 88.2 110 43.6
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 1.0e-15 87.0 132 39.4
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 3.9e-15 85.1 116 41.4
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 2.5e-14 82.4 150 36.7
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 6.3e-13 77.8 116 41.4
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.9e-09 66.2 33 90.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 3.6e-08 62.0 30 80.0
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 4.7e-08 61.6 32 87.5


User provided reference genes

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