Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 1.4e-154 549.7 290 100.0
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 1.4e-154 549.7 290 100.0
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 4.4e-153 544.7 289 99.0
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 5.8e-153 544.3 289 98.6
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 2.7e-142 508.8 271 98.9
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.1e-134 482.6 271 95.2
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 5.1e-133 478.0 271 92.6
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 1.1e-132 476.9 271 94.1
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 4.3e-132 474.9 271 92.6
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 4.3e-132 474.9 271 93.0
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 4.3e-132 474.9 271 92.6
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 4.3e-132 474.9 271 93.0
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.3e-131 473.4 271 92.6
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 8.1e-131 470.7 271 93.4
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 4.0e-130 468.4 271 93.0
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 9.9e-129 463.8 271 91.9
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 4.2e-127 458.4 271 90.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.9e-119 433.0 249 93.2
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 1.8e-117 426.4 260 85.4
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 5.1e-117 424.9 260 85.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 3.3e-116 422.2 260 83.8
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 9.6e-116 420.6 260 83.5
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.4e-114 416.8 260 83.8
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 1.8e-114 416.4 260 82.7
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.0e-114 415.2 249 87.6
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.0e-114 415.2 267 81.3
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 5.3e-114 414.8 260 83.1
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 6.9e-114 414.5 260 82.7
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 6.9e-114 414.5 260 82.7
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 6.9e-114 414.5 260 81.5
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 9.0e-114 414.1 260 82.3
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.2e-113 413.7 260 81.5
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.0e-113 412.9 260 81.5
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 5.8e-113 411.4 260 81.9
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.0e-112 410.6 260 82.7
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 1.0e-112 410.6 260 81.9
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 1.0e-112 410.6 260 83.8
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.7e-112 409.8 260 81.2
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.7e-112 409.8 260 81.5
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.7e-112 409.8 260 81.2
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 2.9e-112 409.1 260 81.5
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 3.8e-112 408.7 284 76.4
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 3.8e-112 408.7 260 81.2
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 3.8e-112 408.7 260 81.9
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.9e-112 408.3 263 79.5
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 6.5e-112 407.9 260 80.4
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 6.5e-112 407.9 260 81.5
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 8.4e-112 407.5 280 77.1
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.1e-111 407.1 260 81.2
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.4e-111 406.8 260 82.3
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.5e-111 406.0 260 80.4
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.2e-111 405.6 260 80.8
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 3.2e-111 405.6 260 80.4
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.5e-111 404.8 272 76.8
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 5.5e-111 404.8 260 81.2
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-110 403.7 260 80.0
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.1e-110 402.9 260 79.6
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.7e-110 402.5 281 76.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 6.0e-110 401.4 260 80.0
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 6.0e-110 401.4 260 80.8
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.3e-109 400.2 260 80.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.8e-109 399.8 260 80.0
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 2.3e-109 399.4 260 79.6
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 3.9e-109 398.7 260 79.6
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 5.1e-109 398.3 260 80.0
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 6.7e-109 397.9 260 78.8
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 6.7e-109 397.9 260 80.4
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 8.7e-109 397.5 254 81.9
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.1e-108 397.1 260 78.1
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 3.3e-108 395.6 260 78.8
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 4.3e-108 395.2 260 79.2
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 5.7e-108 394.8 249 82.7
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 7.4e-108 394.4 260 78.5
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 9.6e-108 394.0 260 77.7
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 9.6e-108 394.0 260 77.7
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 9.6e-108 394.0 260 78.8
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 9.6e-108 394.0 260 79.2
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 9.6e-108 394.0 260 78.8
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.6e-107 393.3 260 78.5
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 3.7e-107 392.1 255 78.8
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 3.7e-107 392.1 260 78.1
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 4.8e-107 391.7 260 77.7
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.8e-107 391.7 260 76.9
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 8.2e-107 391.0 251 81.3
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 9.0e-106 387.5 254 80.3
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.5e-105 386.7 237 84.4
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 2.0e-105 386.3 249 80.7
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 5.9e-105 384.8 261 75.5
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 7.6e-105 384.4 260 77.3
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 7.6e-105 384.4 260 76.9
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.0e-104 384.0 260 78.1
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.3e-104 383.6 260 76.9
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 6.5e-104 381.3 257 76.7
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 8.5e-104 380.9 255 77.3
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 8.5e-104 380.9 260 76.2
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.1e-103 380.6 281 74.4
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.6e-102 376.7 261 73.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 2.1e-102 376.3 255 76.1
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 4.6e-102 375.2 282 73.0
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 6.1e-102 374.8 260 72.7
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 5.7e-100 368.2 221 86.0
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 3.7e-99 365.5 254 75.2
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 4.1e-98 362.1 221 84.6
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 6.9e-98 361.3 237 79.3
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.0e-97 359.8 257 73.2
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.0e-96 357.5 260 69.6
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.3e-96 357.1 256 73.4
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.1e-94 348.2 260 68.5
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.3e-93 346.3 253 71.1
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.2e-91 339.7 254 70.1
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.4e-90 337.0 260 70.8
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.0e-88 330.9 253 66.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.9e-87 326.6 254 66.5
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.4e-85 320.5 260 68.1
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.7e-80 303.5 208 77.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.9e-80 302.8 252 65.5
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.4e-66 255.4 177 75.1
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-64 249.2 272 50.4
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.0e-61 239.2 160 78.8
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.2e-60 237.7 260 54.6
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.1e-58 231.1 150 80.7
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.6e-55 218.8 150 78.7
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 5.7e-52 208.8 235 45.1
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.5e-47 194.1 260 48.5
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.8e-45 187.2 250 40.8
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.6e-40 168.3 246 40.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 4.6e-33 146.0 98 73.5
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.3e-32 144.4 96 80.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.1e-31 141.4 239 36.4
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 7.6e-28 128.6 119 61.3
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.9e-27 126.7 73 86.3
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 7.8e-25 118.6 236 36.0
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.0e-24 118.2 71 81.7
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 4.0e-21 106.3 96 59.4
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 3.0e-08 63.5 42 73.8


User provided reference genes

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