Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p10650 Brassica napus HOM05D001890 ORTHO05D008163 4.7e-64 247.7 122 100.0
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 8.7e-10 67.4 30 96.7
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 2.5e-09 65.9 30 93.3
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 3.3e-09 65.5 30 93.3
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 5.6e-09 64.7 30 90.0
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 5.6e-09 64.7 30 90.0
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 7.4e-09 64.3 30 90.0
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 7.4e-09 64.3 30 90.0
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 7.4e-09 64.3 30 90.0
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 9.6e-09 63.9 30 86.7
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 2.1e-08 62.8 84 45.2
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 2.8e-08 62.4 30 86.7
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 4.8e-08 61.6 30 86.7
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 8.1e-08 60.8 30 83.3
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.4e-07 60.1 30 80.0
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 3.1e-07 58.9 30 80.0
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 4.0e-07 58.5 30 80.0
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 4.0e-07 58.5 30 76.7
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 5.3e-07 58.2 30 80.0
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 6.9e-07 57.8 30 76.7
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 6.9e-07 57.8 30 76.7
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 6.9e-07 57.8 30 80.0
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 9.0e-07 57.4 30 76.7
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 9.0e-07 57.4 30 76.7
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 9.0e-07 57.4 31 71.0
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 9.0e-07 57.4 30 76.7
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 2.0e-06 56.2 30 73.3
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 2.0e-06 56.2 30 73.3
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 2.0e-06 56.2 30 70.0
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 2.6e-06 55.8 30 73.3
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 3.4e-06 55.5 30 76.7
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 4.5e-06 55.1 30 70.0
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 4.5e-06 55.1 30 70.0
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 4.5e-06 55.1 31 71.0
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 5.8e-06 54.7 31 74.2
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 5.8e-06 54.7 30 73.3
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 7.6e-06 54.3 30 73.3
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.0e-05 53.9 55 50.9
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.0e-05 53.9 55 50.9
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 1.0e-05 53.9 30 73.3
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.0e-05 53.9 52 48.1
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.0e-05 53.9 30 70.0
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 1.0e-05 53.9 30 70.0
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 1.0e-05 53.9 30 70.0


User provided reference genes

Program Settings