Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p10180 Brassica napus HOM05D009505 ORTHO05D007552 1.9e-37 158.7 81 100.0
BraA05t19787Z Brassica rapa HOM05D009505 ORTHO05D007552 4.0e-35 151.0 81 96.3
BcaB02g09253 Brassica carinata HOM05D009505 ORTHO05D007552 8.3e-33 143.3 81 91.4
BcaB02g09254 Brassica carinata HOM05D009505 ORTHO05D007552 8.3e-33 143.3 81 91.4
A05p08210 Brassica napus HOM05D009505 ORTHO05D007552 3.3e-29 131.3 81 85.2
BolC4t28121H Brassica oleracea HOM05D009505 ORTHO05D007552 5.4e-24 114.0 81 75.3
BcaC02g07493 Brassica carinata HOM05D009505 ORTHO05D007552 1.2e-23 112.8 81 74.1
C04p66190 Brassica napus HOM05D009505 ORTHO05D007552 1.2e-23 112.8 81 74.1
BcaC01g05595 Brassica carinata HOM05D009505 ORTHO05D007552 7.8e-23 110.2 79 77.2
BcaC01g05596 Brassica carinata HOM05D009505 ORTHO05D007552 7.8e-23 110.2 79 77.2
C03p24490 Brassica napus HOM05D009505 ORTHO05D007552 7.8e-23 110.2 79 77.2
BolC3t14847H Brassica oleracea HOM05D009505 ORTHO05D007552 7.8e-23 110.2 79 77.2
BcaB01g03759 Brassica carinata HOM05D009505 ORTHO05D007552 1.7e-22 109.0 79 72.2
BcaB06g29026 Brassica carinata HOM05D009505 ORTHO05D007552 2.3e-22 108.6 81 74.1
Sp4g20120 Schrenkiella parvula HOM05D009505 ORTHO05D007552 6.6e-22 107.1 81 72.8
BcaC02g11899 Brassica carinata HOM05D009505 ORTHO05D007552 4.3e-21 104.4 81 74.1
A04p28920 Brassica napus HOM05D009505 ORTHO05D007552 1.2e-20 102.8 81 70.4
BraA04t18368Z Brassica rapa HOM05D009505 ORTHO05D007552 1.2e-20 102.8 81 70.4
BcaC02g11900 Brassica carinata HOM05D009505 ORTHO05D007552 1.6e-20 102.4 49 100.0
BcaC02g11902 Brassica carinata HOM05D009505 ORTHO05D007552 1.6e-20 102.4 49 100.0
BolC4t22617H Brassica oleracea HOM05D009505 ORTHO05D007552 1.6e-20 102.4 49 100.0
Thhalv10017906m.g Eutrema salsugineum HOM05D009505 ORTHO05D007552 2.8e-20 101.7 83 69.9
AT2G37750 Arabidopsis thaliana HOM05D009505 ORTHO05D007552 1.2e-18 96.3 83 69.9
AL4G34680 Arabidopsis lyrata HOM05D009505 ORTHO05D007552 2.6e-18 95.1 82 67.1
Carub.0004s1969 Capsella rubella HOM05D009505 ORTHO05D007552 5.8e-18 94.0 84 65.5
CARHR131780 Cardamine hirsuta HOM05D009505 ORTHO05D007552 1.1e-16 89.7 82 67.1
Aa31sc218G10 Aethionema arabicum HOM05D009505 ORTHO05D007552 2.4e-16 88.6 79 62.0
BraA03t11324Z Brassica rapa HOM05D009505 ORTHO05D007552 7.0e-16 87.0 82 64.6
A03p20830 Brassica napus HOM05D009505 ORTHO05D007552 2.7e-15 85.1 82 63.4
THA.LOC104824525 Tarenaya hassleriana HOM05D009505 ORTHO05D007552 1.3e-14 82.8 68 66.2
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.1e-11 73.2 87 49.4
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 5.2e-11 70.9 86 48.8
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.2e-10 69.7 88 47.7
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 5.8e-10 67.4 85 45.9
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 9.9e-10 66.6 86 48.8
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 2.2e-09 65.5 85 48.2
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 4.9e-09 64.3 89 46.1
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 4.9e-09 64.3 87 48.3
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 4.9e-09 64.3 87 48.3
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 6.4e-09 63.9 84 45.2
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 1.4e-08 62.8 91 42.9
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 2.4e-08 62.0 85 45.9
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 2.4e-08 62.0 88 46.6
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 2.4e-08 62.0 93 45.2
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 1.2e-07 59.7 78 50.0
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 1.2e-07 59.7 88 42.0
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 1.2e-07 59.7 89 46.1
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 1.2e-07 59.7 84 44.0
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 3.5e-07 58.2 88 40.9
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 3.5e-07 58.2 89 42.7
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 6.0e-07 57.4 88 47.7
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 7.8e-07 57.0 89 47.2
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 1.0e-06 56.6 89 40.4
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 1.3e-06 56.2 83 41.0
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 1.7e-06 55.8 85 43.5
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 3.0e-06 55.1 88 44.3
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 3.9e-06 54.7 95 36.8
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 3.9e-06 54.7 91 41.8
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 3.9e-06 54.7 95 36.8
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 6.6e-06 53.9 87 40.2


User provided reference genes

Program Settings