Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 1.8e-56 222.6 137 100.0
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 7.2e-29 131.0 144 56.9
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 8.8e-27 124.0 173 56.6
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 2.2e-22 109.4 163 48.5
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 8.5e-22 107.5 163 47.9
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.5e-21 106.7 55 96.4
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 9.4e-21 104.0 161 47.2
BolC4t22582H Brassica oleracea HOM05D032263 ORTHO05D041965 4.0e-19 98.6 104 71.2
C04p09740 Brassica napus HOM05D032263 ORTHO05D041965 2.0e-18 96.3 77 87.0
BolC4t23823H Brassica oleracea HOM05D032263 ORTHO05D104320 2.7e-15 85.9 58 82.8
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.6e-12 76.6 53 73.6
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-11 73.9 50 70.0
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.8e-11 73.2 55 61.8
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 3.0e-11 72.4 55 61.8
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 8.8e-11 70.9 50 66.0
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 8.8e-11 70.9 55 60.0
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.2e-10 70.5 49 67.3
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 3.4e-10 68.9 52 67.3
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 3.4e-10 68.9 54 59.3
BolC7t40930H Brassica oleracea HOM05D001379 ORTHO05D016694 7.5e-10 67.8 52 65.4
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.7e-09 66.6 52 61.5
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.7e-09 66.6 50 66.0
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 1.7e-09 66.6 50 64.0
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.7e-09 66.6 50 66.0
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 2.2e-09 66.2 121 43.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 2.2e-09 66.2 55 56.4
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 2.2e-09 66.2 52 65.4
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-09 66.2 65 53.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.8e-09 65.9 53 60.4
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.8e-09 65.9 52 63.5
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.7e-09 65.5 52 61.5
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 4.8e-09 65.1 45 66.7
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 4.8e-09 65.1 52 65.4
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 4.8e-09 65.1 50 64.0
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 4.8e-09 65.1 52 65.4
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 6.3e-09 64.7 45 68.9
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 6.3e-09 64.7 51 58.8
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 8.3e-09 64.3 52 57.7
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 8.3e-09 64.3 52 59.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 8.3e-09 64.3 52 59.6
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 8.3e-09 64.3 44 70.5
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 8.3e-09 64.3 51 62.7
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.1e-08 63.9 52 57.7
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 1.1e-08 63.9 52 65.4
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.4e-08 63.5 50 62.0
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.8e-08 63.2 45 64.4
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.8e-08 63.2 75 45.3
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 1.8e-08 63.2 52 59.6
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.8e-08 63.2 50 58.0
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.8e-08 63.2 50 60.0
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-08 63.2 61 54.1
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 4.1e-08 62.0 50 60.0
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 4.1e-08 62.0 64 50.0
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 4.1e-08 62.0 50 62.0
C01p38770 Brassica napus HOM05D001379 ORTHO05D001277 4.1e-08 62.0 52 61.5
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 5.4e-08 61.6 50 62.0
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 7.0e-08 61.2 52 57.7
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 7.0e-08 61.2 52 57.7
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 9.1e-08 60.8 61 50.8
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 9.1e-08 60.8 61 50.8
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.2e-07 60.5 52 57.7
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-07 60.5 77 48.1
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 1.2e-07 60.5 80 47.5
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.2e-07 60.5 77 48.1
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-07 60.5 61 52.5
BolC1t03834H Brassica oleracea HOM05D001379 ORTHO05D001277 1.2e-07 60.5 52 59.6
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.0e-07 59.7 52 55.8
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-07 59.7 56 55.4
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.0e-07 59.7 56 55.4
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-07 59.7 56 55.4
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-07 59.7 56 55.4
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-07 59.7 56 55.4
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 3.5e-07 58.9 56 55.4
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 3.5e-07 58.9 77 46.8
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 3.5e-07 58.9 77 46.8
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 4.5e-07 58.5 44 65.9
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 7.7e-07 57.8 56 51.8
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.0e-06 57.4 77 46.8
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.0e-06 57.4 53 54.7
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-06 57.4 56 53.6
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-06 57.0 56 53.6
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-06 57.0 56 53.6
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-06 57.0 56 53.6
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-06 57.0 63 50.8
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-06 57.0 56 53.6
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-06 57.0 56 53.6
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-06 56.6 56 53.6
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 1.7e-06 56.6 49 57.1
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-06 56.6 56 51.8
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-06 56.6 56 53.6
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-06 56.6 56 53.6
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-06 56.6 56 51.8
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-06 56.2 56 51.8
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-06 56.2 53 52.8
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.9e-06 55.8 77 45.5
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 2.9e-06 55.8 54 55.6
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.9e-06 55.8 76 46.1
BcaC01g02359 Brassica carinata HOM05D032582 ORTHO05D039274 2.9e-06 55.8 44 65.9
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.9e-06 55.8 56 51.8
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 2.9e-06 55.8 61 47.5
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.9e-06 55.8 56 53.6
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.9e-06 55.8 61 47.5
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 5.0e-06 55.1 43 60.5
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 5.0e-06 55.1 49 55.1
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-06 55.1 56 51.8
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-06 55.1 49 55.1
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 5.0e-06 55.1 56 51.8
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 6.6e-06 54.7 43 58.1
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 6.6e-06 54.7 56 51.8


User provided reference genes

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