Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p09830 Brassica napus HOM05D008414 ORTHO05D014108 3.6e-55 218.0 110 100.0
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 2.0e-45 185.7 109 86.2
BcaB06g26481 Brassica carinata HOM05D008414 ORTHO05D094346 4.3e-24 114.8 104 62.5
BcaB03g16772 Brassica carinata HOM05D008414 ORTHO05D014108 5.6e-24 114.4 102 61.8
BcaB05g23245 Brassica carinata HOM05D008414 ORTHO05D095473 2.1e-23 112.5 104 60.6
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.1e-23 112.5 104 60.6
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 4.7e-23 111.3 104 59.6
BcaB06g26761 Brassica carinata HOM05D008414 ORTHO05D091670 5.2e-22 107.8 104 58.7
BcaB06g27026 Brassica carinata HOM05D008414 ORTHO05D090558 5.2e-22 107.8 106 55.7
C01p34340 Brassica napus HOM05D008414 ORTHO05D040375 8.9e-22 107.1 77 74.0
BolC1t03404H Brassica oleracea HOM05D008414 ORTHO05D040375 8.9e-22 107.1 77 74.0
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 1.5e-21 106.3 104 57.7
BolC7t40818H Brassica oleracea HOM05D008414 ORTHO05D032445 2.6e-21 105.5 107 57.0
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 5.8e-21 104.4 82 65.9
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 9.9e-21 103.6 113 50.4
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 9.9e-21 103.6 81 65.4
BolC7t41775H Brassica oleracea HOM05D008414 ORTHO05D032311 1.3e-20 103.2 102 58.8
BcaC06g35525 Brassica carinata HOM05D008414 ORTHO05D014108 1.7e-20 102.8 113 50.4
BcaC06g35619 Brassica carinata HOM05D008414 ORTHO05D032311 1.7e-20 102.8 102 57.8
C07p12910 Brassica napus HOM05D008414 ORTHO05D032311 1.7e-20 102.8 102 57.8
BcaB06g26479 Brassica carinata HOM05D008414 ORTHO05D014108 3.8e-20 101.7 75 66.7
C09p45510 Brassica napus HOM05D008414 ORTHO05D032461 3.8e-20 101.7 115 53.9
C07p13930 Brassica napus HOM05D008414 ORTHO05D014108 4.9e-20 101.3 112 50.9
BcaC04g20282 Brassica carinata HOM05D008414 ORTHO05D032461 6.4e-20 100.9 113 54.0
BcaC04g20543 Brassica carinata HOM05D008414 ORTHO05D014108 8.4e-20 100.5 113 49.6
BcaB02g11314 Brassica carinata HOM05D008414 ORTHO05D094225 1.1e-19 100.1 104 56.7
BcaB07g33218 Brassica carinata HOM05D008414 ORTHO05D014108 1.4e-19 99.8 72 68.1
BolC3t18883H Brassica oleracea HOM05D008414 ORTHO05D039896 1.4e-19 99.8 108 54.6
C07p04240 Brassica napus HOM05D008414 ORTHO05D032445 1.9e-19 99.4 98 58.2
C09p42300 Brassica napus HOM05D008414 ORTHO05D014108 1.9e-19 99.4 113 49.6
BolC9t57420H Brassica oleracea HOM05D008414 ORTHO05D032461 2.4e-19 99.0 113 53.1
BcaC06g35065 Brassica carinata HOM05D008414 ORTHO05D014108 4.1e-19 98.2 112 49.1
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 7.1e-19 97.4 108 53.7
BraA01t02473Z Brassica rapa HOM05D008414 ORTHO05D022023 1.7e-17 92.8 90 58.9
BcaB03g16287 Brassica carinata HOM05D008414 ORTHO05D094276 8.7e-17 90.5 72 61.1
BraSC37t46119Z Brassica rapa HOM05D008414 ORTHO05D022023 8.7e-17 90.5 90 57.8
BolC7t41040H Brassica oleracea HOM05D008414 ORTHO05D014108 1.5e-16 89.7 67 65.7
C07p06230 Brassica napus HOM05D008414 ORTHO05D014108 2.5e-16 89.0 83 60.2
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-16 88.6 67 65.7
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 3.6e-15 85.1 113 47.8
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-14 83.2 84 56.0
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-14 82.0 83 57.8
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 9.0e-14 80.5 83 56.6
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 1.2e-10 70.1 97 42.3
BolC9t57108H Brassica oleracea HOM05D008414 ORTHO05D033115 1.2e-10 70.1 47 68.1
BcaB02g10766 Brassica carinata HOM05D008414 ORTHO05D014108 1.6e-10 69.7 99 41.4
C07p05320 Brassica napus HOM05D008414 ORTHO05D033195 1.7e-09 66.2 81 49.4
BolC7t40932H Brassica oleracea HOM05D008414 ORTHO05D033195 1.7e-09 66.2 81 49.4
BcaC06g36431 Brassica carinata HOM05D008414 ORTHO05D032445 5.6e-08 61.2 75 53.3
BcaC01g02039 Brassica carinata HOM05D008414 ORTHO05D008559 1.3e-07 60.1 49 67.3
BcaNung05285 Brassica carinata HOM05D008414 ORTHO05D014108 1.6e-07 59.7 42 69.0
BcaC01g02360 Brassica carinata HOM05D008414 ORTHO05D039896 2.8e-07 58.9 77 51.9
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.8e-07 58.9 107 31.8
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 6.2e-07 57.8 39 69.2
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 8.1e-07 57.4 103 33.0
C01p38760 Brassica napus HOM05D008414 ORTHO05D033115 1.1e-06 57.0 40 62.5
BolC1t03833H Brassica oleracea HOM05D008414 ORTHO05D033115 1.1e-06 57.0 40 62.5
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 1.4e-06 56.6 107 31.8
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 3.1e-06 55.5 65 40.0
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 4.0e-06 55.1 107 30.8
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 4.0e-06 55.1 112 33.9
BcaB02g11224 Brassica carinata HOM05D008414 ORTHO05D096114 5.3e-06 54.7 55 54.5
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 5.3e-06 54.7 103 30.1


User provided reference genes

Program Settings