Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p09390 Brassica napus HOM05D038594 ORTHO05D027301 9.1e-122 440.3 226 100.0
BolC4t22542H Brassica oleracea HOM05D038594 ORTHO05D027301 7.0e-106 387.5 206 97.6
BcaC02g11975 Brassica carinata HOM05D038594 ORTHO05D027301 6.0e-65 251.5 135 94.8
BraA05t19743Z Brassica rapa HOM05D000111 ORTHO05D001475 6.5e-59 231.5 256 58.6
A09p63250 Brassica napus HOM05D000101 ORTHO05D027301 3.6e-25 119.4 95 72.6
BcaNung05799 Brassica carinata HOM05D000101 ORTHO05D000089 1.4e-24 117.5 95 71.6
A10p17490 Brassica napus HOM05D000101 ORTHO05D000089 2.3e-24 116.7 70 87.1
BraA10t43829Z Brassica rapa HOM05D000101 ORTHO05D000089 3.0e-24 116.3 70 87.1
BcaC04g19685 Brassica carinata HOM05D000101 ORTHO05D000089 1.1e-23 114.4 70 85.7
C09p52920 Brassica napus HOM05D000101 ORTHO05D000089 7.5e-23 111.7 70 82.9
Sp1g10910 Schrenkiella parvula HOM05D000101 ORTHO05D000089 4.0e-16 89.4 98 57.1
BcaB07g31809 Brassica carinata HOM05D000101 ORTHO05D000089 3.2e-10 69.7 92 51.1
BolC5t29836H Brassica oleracea HOM05D000101 ORTHO05D000089 5.5e-10 68.9 89 53.9
C05p10930 Brassica napus HOM05D000101 ORTHO05D000089 1.6e-09 67.4 89 53.9
CARHR049180 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.6e-09 66.2 70 52.9
Aa31LG1G2310 Aethionema arabicum HOM05D000101 ORTHO05D000089 4.7e-09 65.9 70 52.9
BcaC05g25202 Brassica carinata HOM05D000137 ORTHO05D000089 6.1e-09 65.5 89 51.7
Aa31LG1G2330 Aethionema arabicum HOM05D000101 ORTHO05D000089 8.0e-09 65.1 70 52.9
AT1G12220 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 8.0e-09 65.1 70 52.9
A05p07740 Brassica napus HOM05D000111 ORTHO05D001475 3.0e-08 63.2 37 94.6
C09p19380 Brassica napus HOM05D000101 ORTHO05D011607 4.0e-08 62.8 70 51.4
BcaB02g09946 Brassica carinata HOM05D000101 ORTHO05D000089 6.8e-08 62.0 70 51.4
BcaC04g22432 Brassica carinata HOM05D000101 ORTHO05D011607 6.8e-08 62.0 70 50.0
CARHR048950 Cardamine hirsuta HOM05D000101 ORTHO05D000089 6.8e-08 62.0 70 51.4
CARHR048990 Cardamine hirsuta HOM05D000101 ORTHO05D011607 6.8e-08 62.0 73 52.1
Aa31sc78G70 Aethionema arabicum HOM05D000101 ORTHO05D000089 8.8e-08 61.6 68 52.9
Aa31LG1G3710 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.2e-07 61.2 136 33.8
BcaC08g42981 Brassica carinata HOM05D000101 ORTHO05D000089 1.2e-07 61.2 70 51.4
BolC9t54847H Brassica oleracea HOM05D000101 ORTHO05D011607 1.2e-07 61.2 70 50.0
BolC6t35351H Brassica oleracea HOM05D000101 ORTHO05D000089 1.5e-07 60.8 70 51.4
BraA09t41678Z Brassica rapa HOM05D000101 ORTHO05D000089 1.5e-07 60.8 70 52.9
CARHR012520 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.5e-07 60.8 70 50.0
Aa31LG1G2920 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.0e-07 60.5 89 43.8
AL1G23590 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 2.6e-07 60.1 70 48.6
BcaC08g43505 Brassica carinata HOM05D000101 ORTHO05D000089 2.6e-07 60.1 70 50.0
C06p08920 Brassica napus HOM05D000101 ORTHO05D011607 2.6e-07 60.1 70 50.0
CARHR013070 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.6e-07 60.1 106 43.4
CARHR049210 Cardamine hirsuta HOM05D000101 ORTHO05D011607 2.6e-07 60.1 70 48.6
Thhalv10024140m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.6e-07 60.1 187 32.1
Aa31csc22G200 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.4e-07 59.7 70 48.6
Aa31LG1G2350 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.4e-07 59.7 96 40.6
BraA10t42882Z Brassica rapa HOM05D000101 ORTHO05D027591 3.4e-07 59.7 70 50.0
A09p63930 Brassica napus HOM05D000101 ORTHO05D000089 4.4e-07 59.3 70 51.4
BcaB07g31810 Brassica carinata HOM05D000101 ORTHO05D000089 5.7e-07 58.9 70 50.0
BolC8t52214H Brassica oleracea HOM05D000101 ORTHO05D000089 7.5e-07 58.5 70 50.0
BraA09t41740Z Brassica rapa HOM05D000101 ORTHO05D000089 9.8e-07 58.2 70 50.0
Aa31LG1G2900 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.3e-06 57.8 77 46.8
Aa31LG2G12240 Aethionema arabicum HOM05D000101 ORTHO05D000089 1.7e-06 57.4 172 32.6
Aa31LG4G13240 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.2e-06 57.0 68 48.5
Aa31LG1G2390 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.8e-06 56.6 68 48.5
Aa31LG1G3730 Aethionema arabicum HOM05D000101 ORTHO05D000089 2.8e-06 56.6 70 48.6
BcaC07g42581 Brassica carinata HOM05D000101 ORTHO05D000089 2.8e-06 56.6 103 42.7
BcaB03g13138 Brassica carinata HOM05D000101 ORTHO05D000089 3.7e-06 56.2 91 45.1
Aa31LG1G3690 Aethionema arabicum HOM05D000101 ORTHO05D000089 4.9e-06 55.8 70 50.0
BcaC07g41710 Brassica carinata HOM05D000101 ORTHO05D000089 4.9e-06 55.8 70 47.1
BolC8t52287H Brassica oleracea HOM05D000101 ORTHO05D000089 4.9e-06 55.8 70 47.1
BolC6t35969H Brassica oleracea HOM05D000101 ORTHO05D000089 6.3e-06 55.5 64 50.0
AL7G41510 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 8.3e-06 55.1 70 48.6


User provided reference genes

Program Settings