Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 0.0e+00 1113.2 727 100.0
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 2.4e-309 1065.1 727 95.3
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.8e-291 1005.7 734 88.3
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 9.6e-290 1000.0 733 88.7
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 8.8e-267 923.7 739 80.5
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 4.0e-243 845.1 742 72.9
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 4.0e-243 845.1 742 72.9
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 7.8e-231 804.3 747 72.4
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 4.6e-223 778.5 738 69.0
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 3.3e-221 772.3 741 69.1
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 6.6e-214 748.0 750 66.7
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 3.0e-206 722.6 447 100.0
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.2e-170 604.4 762 57.7
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 3.1e-163 579.7 741 60.2
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 9.7e-149 531.6 762 55.1
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 2.2e-124 450.7 772 44.9
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.6e-122 444.5 685 44.4
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.5e-122 443.0 727 48.3
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 3.4e-117 426.8 747 43.9
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 7.8e-114 415.6 746 44.9
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.0e-113 415.2 547 46.3
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 3.3e-112 410.2 547 47.0
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 3.3e-112 410.2 772 39.6
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.3e-112 409.1 724 44.9
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 5.2e-110 402.9 781 43.7
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 6.8e-110 402.5 543 46.8
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.2e-109 401.7 723 41.6
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.5e-109 401.4 839 37.5
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.0e-109 401.0 756 44.2
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 2.0e-109 401.0 724 43.9
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 2.9e-108 397.1 758 44.2
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 3.7e-108 396.7 542 46.3
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.9e-108 396.4 758 43.4
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 1.1e-107 395.2 548 46.2
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.4e-107 394.8 731 40.5
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.4e-107 394.0 757 37.6
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.6e-106 391.3 795 43.1
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 7.8e-106 389.0 745 43.1
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 1.3e-105 388.3 549 45.7
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 3.9e-105 386.7 540 50.9
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 5.6e-104 382.9 775 37.5
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.8e-103 380.6 732 42.8
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 3.6e-103 380.2 759 39.3
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 8.0e-103 379.0 537 45.3
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.1e-102 378.6 785 41.3
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.4e-102 378.3 721 40.2
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 1.8e-102 377.9 756 44.8
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 4.0e-102 376.7 750 39.6
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.2e-101 375.2 745 41.7
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.7e-100 371.3 543 46.2
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 3.7e-100 370.2 803 35.9
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.4e-99 368.2 812 35.8
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 4.1e-99 366.7 719 39.1
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.6e-98 364.8 817 36.4
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.5e-98 363.6 724 42.0
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.3e-97 361.7 723 41.8
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 1.7e-97 361.3 780 37.1
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 2.5e-96 357.5 772 39.8
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 1.8e-94 351.3 782 36.2
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.0e-94 350.1 802 35.9
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 5.2e-94 349.7 726 39.4
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.6e-93 347.4 792 36.6
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 5.8e-93 346.3 530 46.8
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 1.4e-91 341.7 727 40.3
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 7.1e-91 339.3 793 34.7
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.7e-90 337.4 489 44.4
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 2.5e-88 330.9 776 39.9
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.2e-87 328.6 743 40.6
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 5.2e-86 323.2 495 41.0
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 1.7e-84 318.2 803 39.1
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 2.1e-82 311.2 745 41.2
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 6.0e-82 309.7 736 38.2
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 4.0e-78 297.0 457 43.1
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 2.0e-77 294.7 769 34.1
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.6e-73 279.6 398 45.5
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 5.6e-72 276.6 543 37.9
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 4.8e-71 273.5 563 40.3
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.9e-67 261.5 420 43.1
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 3.7e-63 247.3 776 31.7
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 7.6e-61 239.6 566 34.8
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.1e-59 235.7 760 31.6
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.2e-53 215.7 737 32.4
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.5e-53 215.3 264 52.3
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 5.5e-51 206.8 601 36.1
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.4e-46 191.4 388 37.4
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 6.9e-46 189.9 508 30.9
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 8.8e-41 172.9 474 33.5
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 9.1e-38 162.9 504 28.0
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 5.0e-36 157.1 504 29.0
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 2.1e-34 151.8 337 35.9
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 8.5e-28 129.8 183 45.9
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.6e-24 118.2 124 54.0
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 2.2e-23 115.2 757 25.8
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.9e-21 107.1 192 41.7
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 6.8e-17 93.6 370 28.4
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 3.8e-12 77.8 74 58.1
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 3.2e-11 74.7 74 54.1
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 3.2e-11 74.7 122 43.4
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.5e-11 73.9 82 53.7
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 1.6e-10 72.4 74 54.1
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 6.8e-09 67.0 70 52.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-06 58.9 77 42.9


User provided reference genes

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