Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p07250 Brassica napus HOM05D007244 ORTHO05D021882 1.3e-94 349.7 182 100.0
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 5.2e-35 151.8 182 52.2
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 5.2e-35 151.8 182 52.2
BcaB07g33782 Brassica carinata HOM05D007244 ORTHO05D021882 4.0e-19 99.0 113 53.1
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 6.9e-19 98.2 178 39.9
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 6.9e-19 98.2 178 39.9
BcaC06g36660 Brassica carinata HOM05D007244 ORTHO05D039184 1.7e-17 93.6 175 39.4
BolC7t40576H Brassica oleracea HOM05D007244 ORTHO05D039184 1.7e-17 93.6 175 39.4
BcaC09g48319 Brassica carinata HOM05D007244 ORTHO05D027185 8.4e-17 91.3 174 37.9
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 1.9e-16 90.1 180 37.8
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 1.9e-16 90.1 180 37.8
BolC5t29837H Brassica oleracea HOM05D007244 ORTHO05D021589 2.4e-16 89.7 166 39.8
BolC2t10659H Brassica oleracea HOM05D007244 ORTHO05D021882 5.4e-16 88.6 147 42.2
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 9.3e-16 87.8 183 40.4
BolC6t35250H Brassica oleracea HOM05D007244 ORTHO05D015497 4.6e-15 85.5 179 39.1
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 1.3e-14 84.0 110 49.1
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 6.7e-14 81.6 178 36.5
BcaB06g25985 Brassica carinata HOM05D001708 ORTHO05D001649 8.7e-14 81.3 126 44.4
A05p03870 Brassica napus HOM05D007244 ORTHO05D027185 2.5e-13 79.7 71 59.2
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 5.6e-13 78.6 192 34.9
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 2.8e-12 76.3 147 37.4
BolC6t35913H Brassica oleracea HOM05D007244 ORTHO05D021882 1.1e-11 74.3 106 50.0
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 2.4e-11 73.2 116 39.7
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 3.1e-11 72.8 182 35.7
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 4.0e-11 72.4 73 56.2
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 4.0e-11 72.4 184 32.6
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 6.9e-11 71.6 177 32.8
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 6.9e-11 71.6 177 36.2
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 9.0e-11 71.2 116 38.8
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 1.5e-10 70.5 76 52.6
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 1.5e-10 70.5 176 35.8
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 1.5e-10 70.5 76 52.6
BolC9t55947H Brassica oleracea HOM05D002126 ORTHO05D002195 2.6e-10 69.7 177 36.2
BolC6t35262H Brassica oleracea HOM05D007244 ORTHO05D027097 3.4e-10 69.3 122 41.0
BraA10t42654Z Brassica rapa HOM05D007244 ORTHO05D024067 4.5e-10 68.9 170 32.4
BolC4t25172H Brassica oleracea HOM05D025388 ORTHO05D033844 5.8e-10 68.6 183 32.2
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 1.3e-09 67.4 107 43.9
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 1.3e-09 67.4 176 34.1
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 1.3e-09 67.4 176 34.1
BraA06t27694Z Brassica rapa HOM05D007244 ORTHO05D027097 2.9e-09 66.2 122 41.0
BcaC09g50339 Brassica carinata HOM05D003857 ORTHO05D004454 6.4e-09 65.1 66 59.1
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 2.4e-08 63.2 84 47.6
BolC7t40578H Brassica oleracea HOM05D007244 ORTHO05D028076 2.4e-08 63.2 50 66.0
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 2.4e-08 63.2 177 33.9
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 3.2e-08 62.8 81 50.6
BcaC07g39785 Brassica carinata HOM05D007244 ORTHO05D011635 4.2e-08 62.4 66 57.6
BolC7t43259H Brassica oleracea HOM05D007244 ORTHO05D105349 5.5e-08 62.0 109 41.3
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 7.1e-08 61.6 45 66.7
C04p05140 Brassica napus HOM05D007244 ORTHO05D011635 7.1e-08 61.6 177 33.3
BolC6t35336H Brassica oleracea HOM05D007244 ORTHO05D011635 7.1e-08 61.6 66 51.5
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 1.2e-07 60.8 75 48.0
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 1.2e-07 60.8 52 61.5
BcaC03g17567 Brassica carinata HOM05D009169 ORTHO05D011621 1.2e-07 60.8 67 52.2
BcaC09g48969 Brassica carinata HOM05D007244 ORTHO05D011635 1.2e-07 60.8 69 47.8
C04p39440 Brassica napus HOM05D007244 ORTHO05D011635 1.2e-07 60.8 52 61.5
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 1.2e-07 60.8 114 42.1
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-07 60.8 52 61.5
BraA09t37805Z Brassica rapa HOM05D007244 ORTHO05D011635 1.2e-07 60.8 110 46.4
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 1.6e-07 60.5 177 33.3
BraA08t33378Z Brassica rapa HOM05D007244 ORTHO05D011709 1.6e-07 60.5 85 44.7
BcaB07g33461 Brassica carinata HOM05D007244 ORTHO05D032887 2.1e-07 60.1 118 39.0
A05p43470 Brassica napus HOM05D007244 ORTHO05D033750 2.1e-07 60.1 46 69.6
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 2.1e-07 60.1 73 53.4
BraA07t31383Z Brassica rapa HOM05D007244 ORTHO05D033750 2.1e-07 60.1 46 69.6
C04p39410 Brassica napus HOM05D007244 ORTHO05D011635 3.5e-07 59.3 52 59.6
BraA06t24270Z Brassica rapa HOM05D007244 ORTHO05D011635 4.6e-07 58.9 107 43.0
A04p29850 Brassica napus HOM05D007244 ORTHO05D028076 6.0e-07 58.5 181 32.0
BraA04t18445Z Brassica rapa HOM05D007244 ORTHO05D028076 6.0e-07 58.5 181 32.0
BolC8t51261H Brassica oleracea HOM05D013597 ORTHO05D017540 7.9e-07 58.2 98 41.8
BcaC09g48023 Brassica carinata HOM05D007244 ORTHO05D011635 1.0e-06 57.8 177 28.8
BolC8t48551H Brassica oleracea HOM05D007244 ORTHO05D011635 1.0e-06 57.8 95 35.8
C04p72950 Brassica napus HOM05D007244 ORTHO05D011635 1.3e-06 57.4 175 30.3
C06p49860 Brassica napus HOM05D007244 ORTHO05D011635 2.3e-06 56.6 48 56.2
C08p13350 Brassica napus HOM05D013597 ORTHO05D017540 2.3e-06 56.6 187 29.4
BcaB07g33891 Brassica carinata HOM05D007244 ORTHO05D011635 3.0e-06 56.2 76 43.4
BcaC03g15155 Brassica carinata HOM05D000026 ORTHO05D021647 3.0e-06 56.2 123 35.0
BolC2t08787H Brassica oleracea HOM05D063828 ORTHO05D040804 3.0e-06 56.2 123 35.0
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 5.1e-06 55.5 183 31.7
BolC3t21246H Brassica oleracea HOM05D007244 ORTHO05D024067 5.1e-06 55.5 117 36.8
BcaC01g01541 Brassica carinata HOM05D000081 ORTHO05D014497 6.7e-06 55.1 41 70.7
BcaC08g43238 Brassica carinata HOM05D007244 ORTHO05D094667 6.7e-06 55.1 58 53.4
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 6.7e-06 55.1 73 50.7
BraA04t18504Z Brassica rapa HOM05D007244 ORTHO05D039573 6.7e-06 55.1 179 32.4
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 8.7e-06 54.7 112 33.9


User provided reference genes

Program Settings