Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 4.5e-163 577.8 277 100.0
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 4.2e-161 571.2 277 99.6
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 5.7e-158 560.8 277 97.1
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 4.4e-150 534.6 278 93.2
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.2e-147 526.6 251 100.0
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 5.9e-139 497.7 276 85.9
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 2.9e-138 495.4 277 85.6
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 8.5e-138 493.8 267 89.5
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 4.2e-137 491.5 276 83.0
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 1.3e-133 479.9 276 80.4
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 2.5e-129 465.7 276 79.3
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.0e-115 419.5 266 73.7
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 5.2e-103 378.3 205 83.9
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.2e-101 372.9 205 83.4
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 3.5e-91 339.0 269 58.4
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 3.5e-91 339.0 272 58.1
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 6.0e-91 338.2 272 57.4
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.0e-90 337.4 273 57.5
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 2.3e-90 336.3 271 58.3
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.3e-90 336.3 276 58.3
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 5.1e-90 335.1 273 57.1
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 6.6e-90 334.7 269 58.0
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 6.6e-90 334.7 269 58.0
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 8.7e-90 334.3 267 56.2
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 3.3e-89 332.4 269 59.5
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 3.3e-89 332.4 272 58.5
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 4.3e-89 332.0 277 55.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.3e-88 330.5 269 57.6
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 1.3e-88 330.5 267 57.3
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.1e-88 329.7 272 55.5
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.1e-88 329.7 264 56.8
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 2.8e-88 329.3 274 56.2
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 3.6e-88 328.9 269 56.5
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 8.1e-88 327.8 267 56.9
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.8e-87 326.6 255 58.4
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 3.1e-87 325.9 250 58.4
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.2e-86 323.9 271 57.6
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 2.6e-86 322.8 268 55.6
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 3.4e-86 322.4 267 54.3
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 3.4e-86 322.4 271 56.8
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 5.8e-86 321.6 255 57.3
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 9.9e-86 320.9 271 56.8
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 2.2e-85 319.7 273 54.9
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 4.9e-85 318.5 255 56.1
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 4.9e-85 318.5 251 56.6
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.1e-84 317.4 274 54.7
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.9e-84 316.6 273 56.4
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 3.2e-84 315.8 255 55.7
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 4.2e-84 315.5 275 56.0
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 7.1e-84 314.7 272 52.9
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.2e-83 313.9 255 58.4
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 2.1e-83 313.2 251 56.6
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.0e-82 310.8 294 52.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.3e-82 310.5 268 54.1
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.7e-82 310.1 309 49.8
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.7e-82 310.1 309 49.8
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 1.7e-82 310.1 272 54.0
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.3e-82 309.7 262 54.6
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 2.3e-82 309.7 251 56.2
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 3.0e-82 309.3 266 53.0
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.1e-81 307.4 251 55.4
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.5e-81 307.0 251 54.2
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.5e-81 306.2 272 55.9
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.6e-81 305.1 266 54.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.1e-80 303.1 329 48.3
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 8.1e-80 301.2 266 54.5
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 8.1e-80 301.2 232 58.6
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 6.9e-79 298.1 279 50.9
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 2.0e-78 296.6 249 53.8
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 3.4e-78 295.8 329 44.7
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 5.8e-78 295.0 245 55.1
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 9.9e-78 294.3 299 49.5
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.3e-77 293.9 264 53.4
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.9e-76 290.0 219 60.7
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 2.4e-76 289.7 255 51.8
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.2e-75 287.3 333 44.1
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 4.6e-75 285.4 270 49.3
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 4.6e-75 285.4 236 54.2
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.0e-74 282.7 300 47.0
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 9.6e-73 277.7 212 58.0
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.1e-72 276.6 201 62.2
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.7e-72 275.8 200 62.5
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.8e-71 273.5 261 51.3
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.1e-71 272.7 255 52.2
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 4.0e-71 272.3 208 59.6
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 6.9e-71 271.6 204 59.8
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.2e-70 270.8 250 50.4
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.9e-69 266.2 239 54.4
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 3.8e-69 265.8 200 59.0
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 3.8e-69 265.8 200 59.0
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 8.4e-69 264.6 249 51.4
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.2e-67 260.8 200 59.0
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 2.3e-66 256.5 191 59.2
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 3.0e-66 256.1 208 54.8
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 3.9e-66 255.8 269 48.0
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 1.9e-65 253.4 280 45.7
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 2.1e-64 250.0 265 49.1
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 7.2e-60 235.0 202 53.5
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 2.1e-59 233.4 330 39.4
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 2.5e-57 226.5 200 55.0
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 8.2e-56 221.5 290 40.0
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 2.4e-55 219.9 188 53.2
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.1e-52 211.1 252 41.7
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.0e-50 204.5 183 50.8
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.8e-50 203.8 349 33.8
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.0e-50 203.0 262 40.1
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 5.7e-49 198.7 226 45.6
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 4.8e-48 195.7 188 52.7
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 2.9e-37 159.8 174 48.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.9e-36 157.1 175 41.7
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 5.5e-36 155.6 182 41.8
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 3.3e-33 146.4 131 50.4
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.6e-27 127.5 125 51.2
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.6e-22 110.9 152 38.8
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 5.5e-20 102.4 92 52.2
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 6.1e-19 99.0 161 36.6
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.4e-15 87.8 80 48.8
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 7.0e-15 85.5 249 26.5
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 1.5e-09 67.8 53 56.6
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.7e-08 64.3 79 43.0


User provided reference genes

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