Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p06890 Brassica napus HOM05D012099 ORTHO05D014504 7.7e-55 216.9 106 100.0
BolC7t45130H Brassica oleracea HOM05D012099 ORTHO05D014504 1.8e-43 179.1 106 83.0
C03p32380 Brassica napus HOM05D012099 ORTHO05D014504 5.2e-43 177.6 106 83.0
C07p23600 Brassica napus HOM05D012099 ORTHO05D014504 5.2e-43 177.6 106 83.0
BolC2t07316H Brassica oleracea HOM05D012099 ORTHO05D014504 6.3e-41 170.6 110 78.2
BolC9t53522H Brassica oleracea HOM05D012099 ORTHO05D014504 1.6e-39 166.0 129 68.2
A08p10810 Brassica napus HOM05D012099 ORTHO05D014504 5.6e-37 157.5 101 77.2
C03p52420 Brassica napus HOM05D012099 ORTHO05D014504 6.6e-30 134.0 86 79.1
Sp4g18830 Schrenkiella parvula HOM05D000874 ORTHO05D001049 1.2e-12 76.6 119 39.5
AT2G36550 Arabidopsis thaliana HOM05D000874 ORTHO05D001049 1.1e-11 73.6 96 43.8
Sp4g18840 Schrenkiella parvula HOM05D000874 ORTHO05D001049 1.1e-11 73.6 95 44.2
CARHR130830 Cardamine hirsuta HOM05D000874 ORTHO05D001049 2.3e-11 72.4 96 40.6
AL4G32720 Arabidopsis lyrata HOM05D000874 ORTHO05D001049 8.9e-11 70.5 95 44.2
Carub.0004s1834 Capsella rubella HOM05D000874 ORTHO05D001049 8.9e-11 70.5 95 44.2
A04p28040 Brassica napus HOM05D000874 ORTHO05D001049 2.6e-10 68.9 94 41.5
Carub.0004s1835 Capsella rubella HOM05D000874 ORTHO05D001049 3.4e-10 68.6 95 42.1
BraA04t18291Z Brassica rapa HOM05D000874 ORTHO05D001049 7.6e-10 67.4 94 40.4
CARHR130840 Cardamine hirsuta HOM05D000874 ORTHO05D001049 1.3e-09 66.6 96 38.5
AT2G36540 Arabidopsis thaliana HOM05D000874 ORTHO05D001049 1.7e-09 66.2 94 41.5
BcaC01g03453 Brassica carinata HOM05D059306 ORTHO05D039754 3.8e-09 65.1 72 55.6
BolC4t22804H Brassica oleracea HOM05D000874 ORTHO05D001049 3.8e-09 65.1 95 40.0
Thhalv10027102m.g Eutrema salsugineum HOM05D000874 ORTHO05D001049 4.9e-09 64.7 96 38.5
BcaC02g11772 Brassica carinata HOM05D000874 ORTHO05D001049 1.1e-08 63.5 95 38.9
C04p65450 Brassica napus HOM05D000874 ORTHO05D001049 1.9e-08 62.8 71 46.5
BraA05t19883Z Brassica rapa HOM05D000874 ORTHO05D001049 3.2e-08 62.0 95 36.8
C04p11550 Brassica napus HOM05D000874 ORTHO05D001049 7.8e-07 57.4 71 45.1
BcaC02g07585 Brassica carinata HOM05D000874 ORTHO05D001049 1.3e-06 56.6 86 38.4


User provided reference genes

Program Settings