Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 3.4e-257 891.3 513 100.0
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 1.1e-250 869.8 514 90.9
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 9.7e-228 793.5 516 92.2
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 3.9e-213 745.0 527 81.6
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 2.2e-211 739.2 528 81.4
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 5.4e-162 575.1 611 60.7
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 5.1e-160 568.5 631 61.6
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 1.5e-148 530.4 626 60.1
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 2.0e-148 530.0 630 57.6
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 1.6e-145 520.4 629 56.8
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 2.1e-134 483.4 570 59.3
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 2.0e-71 274.2 646 38.4
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 4.5e-68 263.1 680 38.1
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 1.9e-42 177.9 553 32.4
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 5.2e-40 169.9 553 32.0
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 9.2e-37 159.1 435 35.4
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 3.0e-35 154.1 549 32.6
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 6.6e-35 152.9 447 33.8
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.9e-34 151.4 598 30.6
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.9e-34 151.4 590 30.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 1.9e-34 151.4 599 31.6
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 7.3e-34 149.4 455 34.3
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 7.3e-34 149.4 542 32.3
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 8.1e-33 146.0 422 34.6
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 1.1e-32 145.6 594 31.0
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 2.4e-32 144.4 341 37.8
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 2.6e-31 141.0 582 28.7
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.7e-30 138.3 423 33.6
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 1.7e-30 138.3 600 29.8
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 2.2e-30 137.9 488 32.6
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.2e-30 137.9 424 32.3
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.2e-30 137.9 424 32.3
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 2.9e-30 137.5 444 31.3
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 4.9e-30 136.7 494 31.4
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 8.4e-30 136.0 356 36.8
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 8.4e-30 136.0 356 36.8
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 1.4e-29 135.2 447 32.0
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.9e-29 134.8 443 32.1
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 2.4e-29 134.4 444 32.0
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 3.2e-29 134.0 423 33.3
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 1.2e-28 132.1 525 29.1
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 1.6e-28 131.7 513 30.0
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.1e-28 131.3 442 32.4
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.7e-28 131.0 406 33.5
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 1.7e-27 128.3 541 29.4
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.3e-27 127.9 354 35.0
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 6.6e-27 126.3 446 30.9
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 7.3e-26 122.9 432 31.0
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 9.6e-26 122.5 297 36.0
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 4.8e-25 120.2 567 29.1
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 8.1e-25 119.4 564 28.7
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.4e-24 118.6 442 31.9
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 1.4e-24 118.6 353 33.4
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 4.0e-24 117.1 369 33.6
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 9.0e-24 115.9 279 34.1
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.2e-23 115.5 335 32.5
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 2.0e-23 114.8 451 30.4
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.6e-23 114.4 436 31.9
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 7.6e-23 112.8 568 27.3
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 1.3e-22 112.1 356 32.0
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 2.2e-22 111.3 288 35.8
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 2.9e-22 110.9 475 29.7
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 4.9e-22 110.2 553 28.6
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.4e-21 108.6 463 31.3
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 2.4e-21 107.8 487 29.8
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 3.2e-21 107.5 422 32.5
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 4.2e-21 107.1 272 36.0
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 5.4e-21 106.7 339 33.3
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 9.3e-21 105.9 433 30.7
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 2.1e-20 104.8 355 30.7
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 3.5e-20 104.0 309 33.3
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 2.3e-19 101.3 458 30.8
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 5.1e-19 100.1 307 33.9
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 6.7e-19 99.8 422 30.6
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 6.7e-19 99.8 484 30.4
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 1.9e-18 98.2 361 31.6
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 2.5e-18 97.8 442 29.9
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 2.5e-18 97.8 499 29.9
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 7.4e-18 96.3 422 29.1
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 9.6e-18 95.9 408 29.7
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 9.6e-18 95.9 441 27.2
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 1.6e-17 95.1 430 29.8
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 2.1e-17 94.7 456 28.7
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 2.8e-17 94.4 395 30.6
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.1e-16 92.4 409 29.8
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 2.4e-16 91.3 412 28.6
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 2.0e-15 88.2 445 29.4
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 4.5e-15 87.0 441 30.8
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 3.8e-14 84.0 321 31.2
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 7.9e-12 76.3 227 34.8
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 7.9e-12 76.3 315 30.2
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 2.3e-11 74.7 172 37.2
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 3.0e-11 74.3 359 29.2
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 3.9e-11 73.9 303 29.0
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 3.9e-11 73.9 390 29.2
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 5.1e-11 73.6 296 28.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 2.5e-10 71.2 422 28.4
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 2.5e-10 71.2 222 31.1
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 2.8e-09 67.8 163 35.0
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 8.2e-09 66.2 93 46.2
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 7.6e-07 59.7 233 33.5
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 1.3e-06 58.9 114 36.0
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 8.4e-06 56.2 111 36.0


User provided reference genes

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