Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-55 218.0 102 100.0
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 9.7e-55 216.5 102 99.0
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 6.3e-54 213.8 100 99.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-53 211.8 102 99.0
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-39 164.9 102 76.5
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 4.4e-39 164.5 103 78.6
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 4.5e-36 154.5 97 74.2
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 1.7e-35 152.5 103 74.8
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 2.9e-35 151.8 102 68.6
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 2.9e-35 151.8 102 68.6
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 5.0e-35 151.0 103 73.8
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 5.0e-35 151.0 103 71.8
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 5.0e-35 151.0 103 73.8
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 3.2e-34 148.3 103 69.9
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 6.1e-33 144.1 100 69.0
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 5.2e-32 141.0 92 70.7
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 5.2e-32 141.0 92 70.7
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 5.2e-32 141.0 92 70.7
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 2.6e-31 138.7 102 66.7
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 2.6e-31 138.7 102 66.7
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 7.5e-31 137.1 102 66.7
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 9.8e-31 136.7 97 64.9
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 9.8e-31 136.7 91 69.2
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.3e-30 136.3 91 67.0
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 1.7e-30 136.0 88 69.3
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 1.7e-30 136.0 88 69.3
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 1.7e-30 136.0 88 69.3
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.7e-30 136.0 90 65.6
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 2.8e-30 135.2 102 65.7
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.7e-30 134.8 94 64.9
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-30 134.4 89 67.4
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 8.3e-30 133.7 97 62.9
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 8.3e-30 133.7 101 64.4
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 8.3e-30 133.7 107 63.6
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 8.3e-30 133.7 99 68.7
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-29 132.9 89 66.3
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.8e-29 132.5 87 70.1
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-29 132.1 78 73.1
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 4.1e-29 131.3 75 73.3
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.4e-29 131.0 90 67.8
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 5.4e-29 131.0 107 61.7
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 5.4e-29 131.0 92 66.3
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-28 129.8 89 62.9
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-28 129.8 91 61.5
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 1.2e-28 129.8 91 61.5
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.0e-28 129.0 85 62.4
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.0e-28 129.0 90 67.8
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 2.0e-28 129.0 92 67.4
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 2.7e-28 128.6 89 64.0
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 2.7e-28 128.6 89 64.0
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.7e-28 128.6 92 62.0
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.9e-28 127.5 88 65.9
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 7.7e-28 127.1 85 65.9
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 1.3e-27 126.3 97 59.8
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.7e-27 125.9 89 65.2
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.3e-27 125.6 92 67.4
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 3.8e-27 124.8 97 62.9
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.5e-27 124.0 102 57.8
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 8.6e-27 123.6 90 65.6
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 1.1e-26 123.2 97 59.8
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 9.5e-26 120.2 95 62.1
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-25 119.0 89 65.2
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-25 117.9 99 61.6
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.7e-25 117.9 95 58.9
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.4e-24 116.3 65 72.3
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-24 116.3 75 69.3
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-24 115.9 91 59.3
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.0e-24 115.2 91 61.5
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.0e-24 114.8 91 58.2
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.2e-23 113.2 96 51.0
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 2.6e-23 112.1 91 57.1
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.4e-23 111.7 91 61.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.4e-23 111.3 70 75.7
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 4.4e-23 111.3 72 73.6
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.3e-22 107.5 92 55.4
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-21 106.7 78 56.4
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.8e-21 105.9 90 58.9
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.4e-21 105.5 91 57.1
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.3e-19 99.8 96 49.0
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.0e-16 88.6 89 48.3
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 4.0e-16 88.2 93 47.3
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.2e-15 86.7 87 46.0
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.2e-15 86.7 87 44.8
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 2.0e-15 85.9 84 46.4
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 2.6e-15 85.5 86 44.2
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 2.6e-15 85.5 87 44.8
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 2.6e-15 85.5 87 44.8
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 3.4e-15 85.1 87 44.8
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 3.4e-15 85.1 87 44.8
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 5.8e-15 84.3 86 43.0
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 7.5e-15 84.0 87 43.7
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 9.8e-15 83.6 94 50.0
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 9.8e-15 83.6 86 44.2
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 2.2e-14 82.4 94 48.9
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 2.2e-14 82.4 88 48.9
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 2.2e-14 82.4 88 48.9
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 3.7e-14 81.6 91 49.5
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 8.3e-14 80.5 86 41.9
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 1.1e-13 80.1 90 52.2
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-13 80.1 92 48.9
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.2e-12 76.6 88 46.6
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 2.7e-12 75.5 95 44.2
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 2.7e-12 75.5 92 43.5
A04p02110 Brassica napus HOM05D014590 ORTHO05D017585 1.1e-10 70.1 88 43.2
BraA04t15937Z Brassica rapa HOM05D014590 ORTHO05D017585 1.1e-10 70.1 88 43.2
BcaC02g10070 Brassica carinata HOM05D014590 ORTHO05D017585 5.6e-10 67.8 82 41.5
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 7.3e-10 67.4 88 37.5
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 7.3e-10 67.4 88 37.5
Carub.0005s2631 Capsella rubella HOM05D014590 ORTHO05D017585 2.1e-09 65.9 91 40.7


User provided reference genes

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