Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 1.3e-107 392.9 180 100.0
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 4.2e-53 211.8 99 100.0
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 2.6e-47 192.6 157 55.4
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 5.0e-46 188.3 170 52.9
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-44 183.7 80 100.0
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-44 183.7 80 100.0
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 2.1e-44 183.0 176 52.8
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 3.6e-44 182.2 80 98.8
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 3.6e-44 182.2 80 98.8
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 7.5e-42 174.5 100 85.0
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-41 173.7 103 81.6
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 6.1e-36 154.8 99 71.7
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 9.8e-34 147.5 96 72.9
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-33 146.4 99 69.7
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 5.4e-32 141.7 100 69.0
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 1.6e-31 140.2 100 68.0
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.7e-31 139.4 95 66.3
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 3.5e-31 139.0 97 69.1
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.5e-31 138.7 95 64.2
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-29 133.7 99 65.7
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 3.2e-29 132.5 101 63.4
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.8e-28 129.4 90 63.3
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.7e-28 128.6 100 59.0
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 4.7e-28 128.6 92 63.0
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 1.4e-27 127.1 92 63.0
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.8e-27 126.7 92 62.0
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-27 126.3 99 60.6
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 2.3e-27 126.3 99 60.6
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 6.8e-27 124.8 93 64.5
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 6.8e-27 124.8 93 64.5
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 6.8e-27 124.8 93 64.5
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 6.8e-27 124.8 93 64.5
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 8.8e-27 124.4 104 62.5
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 8.8e-27 124.4 97 57.7
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-26 124.0 103 61.2
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-26 124.0 104 61.5
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-26 124.0 103 61.2
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.6e-26 122.9 90 65.6
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.6e-26 122.9 95 62.1
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 3.4e-26 122.5 87 59.8
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.4e-26 122.1 92 62.0
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.4e-26 122.1 89 62.9
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.4e-26 122.1 99 62.6
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-26 121.7 89 62.9
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 7.5e-26 121.3 96 61.5
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 9.8e-26 120.9 96 60.4
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-25 120.2 76 67.1
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.7e-25 120.2 89 60.7
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-25 119.8 92 64.1
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 3.7e-25 119.0 89 67.4
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.9e-25 118.6 85 62.4
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 4.9e-25 118.6 99 59.6
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 4.9e-25 118.6 89 67.4
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 4.9e-25 118.6 89 67.4
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 6.3e-25 118.2 92 58.7
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.8e-24 116.7 85 60.0
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-24 116.3 108 57.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-24 116.3 89 60.7
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 2.4e-24 116.3 92 58.7
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 2.4e-24 116.3 92 58.7
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 3.1e-24 115.9 73 68.5
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 3.1e-24 115.9 89 58.4
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 3.1e-24 115.9 89 58.4
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.4e-24 115.2 89 59.6
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.0e-24 114.8 76 61.8
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 7.0e-24 114.8 89 59.6
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.6e-23 113.6 90 63.3
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 3.5e-23 112.5 89 65.2
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.0e-22 110.9 97 56.7
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.0e-22 110.9 92 58.7
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 2.3e-22 109.8 76 63.2
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 8.6e-22 107.8 93 53.8
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-21 107.1 69 66.7
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.9e-21 106.7 92 50.0
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.5e-21 106.3 92 57.6
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 7.3e-21 104.8 170 44.1
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-19 100.5 72 63.9
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.3e-17 94.0 71 59.2
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.9e-17 92.8 95 43.2
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 4.9e-17 92.0 88 50.0
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-16 90.9 97 52.6
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.8e-16 90.1 87 49.4
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.2e-16 89.4 89 51.7
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.2e-15 87.4 89 53.9
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 2.0e-15 86.7 99 43.4
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 3.5e-15 85.9 87 47.1
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 5.9e-15 85.1 87 48.3
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.9e-13 80.1 88 47.7
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 1.9e-13 80.1 88 47.7
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 1.9e-13 80.1 88 47.7
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 2.5e-13 79.7 88 47.7
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 2.5e-13 79.7 88 47.7
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 5.6e-13 78.6 96 44.8
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 5.6e-13 78.6 86 46.5
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 9.5e-13 77.8 88 47.7
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 2.8e-12 76.3 72 50.0
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 6.8e-11 71.6 93 47.3
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 6.8e-11 71.6 87 44.8
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 8.9e-11 71.2 90 47.8
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 8.9e-11 71.2 90 47.8
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 1.2e-10 70.9 90 43.3
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 1.5e-10 70.5 93 46.2
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 5.8e-10 68.6 85 41.2
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 3.7e-09 65.9 99 39.4
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 1.4e-08 63.9 85 38.8
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 3.2e-08 62.8 89 40.4


User provided reference genes

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