Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p04170 Brassica napus HOM05D008776 ORTHO05D005587 2.6e-92 342.0 175 100.0
BolC4t22056H Brassica oleracea HOM05D008776 ORTHO05D005587 2.6e-92 342.0 175 100.0
C05p54830 Brassica napus HOM05D008776 ORTHO05D005587 8.4e-91 337.0 175 98.9
BolC5t29828H Brassica oleracea HOM05D008776 ORTHO05D005587 5.5e-90 334.3 175 98.3
C01p32810 Brassica napus HOM05D008776 ORTHO05D005587 2.5e-87 325.5 175 96.6
BcaC09g49800 Brassica carinata HOM05D008776 ORTHO05D005587 3.3e-71 271.9 182 83.0
BcaC05g25214 Brassica carinata HOM05D008776 ORTHO05D005587 2.8e-62 242.3 122 99.2
BcaC05g29210 Brassica carinata HOM05D008776 ORTHO05D005587 1.8e-61 239.6 121 98.3
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 1.6e-49 199.9 132 84.8
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 8.6e-43 177.6 140 74.3
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 3.3e-42 175.6 142 73.9
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 1.6e-41 173.3 141 73.0
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 1.6e-41 173.3 141 73.0
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 1.6e-41 173.3 141 73.0
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 5.7e-39 164.9 136 69.9
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 2.2e-38 162.9 147 63.9
CARHR106560 Cardamine hirsuta HOM05D008776 ORTHO05D005587 4.1e-37 158.7 138 65.2
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 2.0e-36 156.4 147 61.9
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 2.0e-36 156.4 147 61.9
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 7.8e-36 154.5 138 64.5
BolC1t03218H Brassica oleracea HOM05D008776 ORTHO05D005587 1.7e-35 153.3 75 98.7
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 2.5e-34 149.4 144 62.5
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 2.5e-34 149.4 144 62.5
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 3.3e-34 149.1 149 62.4
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 9.5e-34 147.5 149 62.4
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 1.6e-33 146.7 145 60.7
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 9.2e-29 131.0 144 60.4
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 5.0e-27 125.2 114 64.0
C09p31770 Brassica napus HOM05D008776 ORTHO05D042895 8.9e-16 87.8 117 46.2
BolC9t56034H Brassica oleracea HOM05D008776 ORTHO05D042895 8.9e-16 87.8 117 46.2
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 9.9e-15 84.3 147 41.5
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 4.1e-13 79.0 148 40.5
C03p78480 Brassica napus HOM05D032251 ORTHO05D097000 1.5e-10 70.5 42 85.7
BolC1t03288H Brassica oleracea HOM05D032251 ORTHO05D042368 1.5e-10 70.5 42 85.7
C05p21110 Brassica napus HOM05D032251 ORTHO05D042368 3.6e-09 65.9 43 83.7
BraA08t35093Z Brassica rapa HOM05D000048 ORTHO05D000207 6.8e-08 61.6 56 66.1
A08p31710 Brassica napus HOM05D000048 ORTHO05D000207 4.4e-07 58.9 56 64.3


User provided reference genes

Program Settings