Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 1.5e-170 602.8 328 100.0
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 1.5e-170 602.8 328 100.0
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 2.2e-161 572.4 328 87.2
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 1.4e-155 553.1 328 92.7
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 1.8e-155 552.7 328 92.1
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 1.0e-150 537.0 328 90.5
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 1.0e-150 537.0 323 92.3
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 2.3e-150 535.8 329 90.6
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 2.9e-137 492.3 330 86.1
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 1.0e-105 387.5 240 93.8
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 1.2e-90 337.4 241 86.3
BcaC08g43470 Brassica carinata HOM05D011346 ORTHO05D015475 1.0e-81 307.8 151 95.4
BcaC09g51490 Brassica carinata HOM05D011346 ORTHO05D015475 2.2e-76 290.0 159 86.2
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 2.7e-74 283.1 192 91.1
BcaC02g12486 Brassica carinata HOM05D011346 ORTHO05D015475 1.3e-68 264.2 123 97.6
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 1.3e-68 264.2 171 95.9
C04p11210 Brassica napus HOM05D011346 ORTHO05D000083 1.5e-48 197.6 109 85.3
BolC1t05719H Brassica oleracea HOM05D000205 ORTHO05D000438 3.6e-26 123.2 296 42.2
C02p35810 Brassica napus HOM05D013145 ORTHO05D014945 8.0e-26 122.1 91 62.6
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 1.8e-22 110.9 173 45.7
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 7.0e-22 109.0 172 45.3
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 6.6e-20 102.4 92 63.0
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 6.6e-20 102.4 92 63.0
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 1.5e-19 101.3 92 62.0
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 2.5e-19 100.5 172 43.0
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 2.5e-19 100.5 92 63.0
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 1.6e-18 97.8 92 62.0
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 4.7e-18 96.3 92 62.0
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 4.7e-18 96.3 92 62.0
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 4.7e-18 96.3 185 41.6
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 6.1e-18 95.9 93 63.4
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 6.1e-18 95.9 93 63.4
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 3.0e-17 93.6 227 40.5
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 4.0e-17 93.2 226 40.3
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 5.2e-17 92.8 181 40.3
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 8.9e-17 92.0 92 60.9
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 8.9e-17 92.0 92 60.9
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.5e-16 91.3 91 59.3
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.5e-16 91.3 91 59.3
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 3.4e-16 90.1 91 60.4
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 5.7e-16 89.4 91 59.3
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 5.7e-16 89.4 181 39.8
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 7.5e-16 89.0 231 36.8
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 9.8e-16 88.6 182 41.2
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 2.2e-15 87.4 203 37.9
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 2.2e-15 87.4 91 59.3
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 2.2e-15 87.4 93 60.2
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 2.9e-15 87.0 167 38.9
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 2.9e-15 87.0 167 38.9
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 2.9e-15 87.0 93 60.2
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 2.9e-15 87.0 91 58.2
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 4.9e-15 86.3 91 58.2
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 6.4e-15 85.9 223 39.5
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 6.4e-15 85.9 207 37.7
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 8.3e-15 85.5 91 58.2
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 8.3e-15 85.5 161 43.5
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.1e-14 85.1 88 60.2
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 1.8e-14 84.3 182 40.7
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 2.4e-14 84.0 90 56.7
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 3.2e-14 83.6 91 58.2
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 3.2e-14 83.6 91 58.2
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 4.1e-14 83.2 161 39.1
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 4.1e-14 83.2 208 38.0
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 7.0e-14 82.4 97 53.6
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 7.0e-14 82.4 93 53.8
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 9.2e-14 82.0 168 39.9
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 9.2e-14 82.0 92 54.3
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 1.2e-13 81.6 142 42.3
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 1.2e-13 81.6 93 53.8
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 1.2e-13 81.6 142 42.3
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 1.6e-13 81.3 95 52.6
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 1.6e-13 81.3 92 54.3
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 2.7e-13 80.5 93 59.1
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 2.7e-13 80.5 208 38.0
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 2.7e-13 80.5 170 40.0
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 4.6e-13 79.7 97 54.6
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 4.6e-13 79.7 207 35.3
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 4.6e-13 79.7 207 35.3
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 7.8e-13 79.0 167 39.5
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 7.8e-13 79.0 155 42.6
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 7.8e-13 79.0 155 42.6
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 1.0e-12 78.6 163 42.3
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 1.0e-12 78.6 91 54.9
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 1.0e-12 78.6 165 41.2
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 1.0e-12 78.6 163 42.3
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 1.3e-12 78.2 95 52.6
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 1.7e-12 77.8 93 57.0
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 2.3e-12 77.4 95 52.6
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 3.0e-12 77.0 87 58.6
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 3.0e-12 77.0 203 37.9
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 3.9e-12 76.6 87 58.6
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 5.0e-12 76.3 90 53.3
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 5.0e-12 76.3 91 54.9
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 5.0e-12 76.3 90 53.3
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 5.0e-12 76.3 95 51.6
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 5.0e-12 76.3 95 51.6
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 6.6e-12 75.9 269 32.3
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 6.6e-12 75.9 87 56.3
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 6.6e-12 75.9 163 40.5
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 6.6e-12 75.9 95 52.6
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 8.6e-12 75.5 92 56.5
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 8.6e-12 75.5 163 41.7
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 1.1e-11 75.1 146 39.0
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 1.1e-11 75.1 74 59.5
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 1.1e-11 75.1 72 62.5
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 1.5e-11 74.7 93 57.0
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.5e-11 74.7 98 52.0
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.9e-11 74.3 270 31.1
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 2.5e-11 73.9 93 57.0
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 3.3e-11 73.6 97 52.6
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 3.3e-11 73.6 168 39.3
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 7.3e-11 72.4 143 42.0
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 9.5e-11 72.0 95 48.4
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 9.5e-11 72.0 81 55.6
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 9.5e-11 72.0 175 36.6
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 9.5e-11 72.0 81 55.6
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 9.5e-11 72.0 81 55.6
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 1.2e-10 71.6 92 54.3
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 1.2e-10 71.6 94 47.9
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 2.8e-10 70.5 164 37.8
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 2.8e-10 70.5 92 46.7
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 2.8e-10 70.5 142 41.5
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 2.8e-10 70.5 72 65.3
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 3.6e-10 70.1 161 40.4
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 3.6e-10 70.1 81 55.6
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 4.7e-10 69.7 74 58.1
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 4.7e-10 69.7 98 50.0
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 6.2e-10 69.3 92 52.2
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 6.2e-10 69.3 83 56.6
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 8.0e-10 68.9 92 52.2
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 8.0e-10 68.9 92 52.2
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 8.0e-10 68.9 98 50.0
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 1.0e-09 68.6 92 53.3
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 1.0e-09 68.6 83 55.4
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 1.0e-09 68.6 160 37.5
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 1.0e-09 68.6 98 50.0
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 1.4e-09 68.2 81 53.1
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 1.4e-09 68.2 81 55.6
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 1.8e-09 67.8 81 55.6
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 1.8e-09 67.8 87 50.6
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 1.8e-09 67.8 98 49.0
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 1.8e-09 67.8 81 55.6
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 2.3e-09 67.4 73 54.8
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 3.1e-09 67.0 174 38.5
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 3.1e-09 67.0 163 40.5
C08p50480 Brassica napus HOM05D003240 ORTHO05D101800 4.0e-09 66.6 60 66.7
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 5.2e-09 66.2 71 57.7
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 8.9e-09 65.5 78 56.4
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 1.2e-08 65.1 92 48.9
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 1.2e-08 65.1 174 37.4
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 1.5e-08 64.7 131 40.5
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 2.0e-08 64.3 83 53.0
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 5.8e-08 62.8 140 40.7
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 9.8e-08 62.0 231 30.7
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 9.8e-08 62.0 51 68.6
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 9.8e-08 62.0 87 44.8
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 2.2e-07 60.8 61 60.7
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 2.2e-07 60.8 175 34.9
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 2.2e-07 60.8 61 60.7
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 2.9e-07 60.5 88 43.2
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 3.7e-07 60.1 177 32.2
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 6.4e-07 59.3 73 50.7
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 8.3e-07 58.9 94 42.6
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 1.4e-06 58.2 177 32.2
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 1.4e-06 58.2 177 32.2
BolC5t29061H Brassica oleracea HOM05D010893 ORTHO05D032720 1.4e-06 58.2 64 59.4
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 1.4e-06 58.2 63 58.7
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 1.9e-06 57.8 82 53.7
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 3.2e-06 57.0 196 34.7
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 4.1e-06 56.6 151 50.3
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 4.1e-06 56.6 169 36.1
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 5.4e-06 56.2 77 46.8
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 5.4e-06 56.2 77 46.8
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 7.0e-06 55.8 80 51.2
BolC5t34528H Brassica oleracea HOM05D003240 ORTHO05D019881 7.0e-06 55.8 73 47.9
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 7.0e-06 55.8 51 68.6


User provided reference genes

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