Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 2.8e-180 635.2 329 100.0
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 2.8e-148 528.9 284 97.9
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 8.3e-148 527.3 296 94.6
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 3.1e-147 525.4 284 97.5
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 8.6e-137 490.7 326 83.1
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 8.3e-132 474.2 285 88.1
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 2.0e-130 469.5 285 88.4
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 2.0e-125 453.0 284 83.1
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 9.9e-125 450.7 284 82.7
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 1.6e-122 443.4 284 82.0
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 1.7e-121 439.9 284 81.3
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.3e-116 423.7 289 78.5
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 8.4e-116 421.0 288 77.4
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 1.1e-115 420.6 289 78.5
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 5.4e-115 418.3 289 77.5
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 5.4e-115 418.3 289 78.2
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 4.6e-114 415.2 289 76.8
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 6.0e-114 414.8 289 77.2
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 1.0e-113 414.1 289 77.9
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 5.6e-112 408.3 302 74.8
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 2.8e-111 406.0 301 74.4
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 2.8e-111 406.0 301 74.4
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 3.6e-111 405.6 301 74.8
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.4e-110 403.7 284 75.0
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.4e-110 403.7 302 72.8
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 9.0e-110 401.0 284 75.4
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 2.2e-108 396.4 337 66.2
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 7.8e-106 387.9 337 65.6
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 1.4e-102 377.1 289 69.2
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 3.1e-102 375.9 289 69.2
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 5.3e-102 375.2 289 69.9
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 6.9e-102 374.8 287 70.7
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 1.2e-101 374.0 289 69.6
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 2.6e-101 372.9 290 70.0
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 3.4e-101 372.5 290 69.3
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 3.4e-101 372.5 288 69.8
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 4.5e-101 372.1 288 70.5
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 1.3e-100 370.5 289 68.5
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 1.7e-100 370.2 289 67.8
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 2.9e-100 369.4 287 69.0
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 4.9e-100 368.6 288 68.1
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 4.9e-100 368.6 291 67.0
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 8.4e-100 367.9 290 68.6
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 8.4e-100 367.9 290 68.6
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.1e-99 367.5 284 69.4
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 1.9e-99 366.7 290 69.0
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 1.9e-99 366.7 290 69.3
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 2.4e-99 366.3 291 68.4
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 4.2e-99 365.5 288 68.4
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 7.1e-99 364.8 290 67.2
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 9.3e-99 364.4 291 68.4
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 9.3e-99 364.4 291 68.4
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 9.3e-99 364.4 289 67.8
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 9.3e-99 364.4 288 67.7
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 9.3e-99 364.4 288 68.4
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.2e-98 364.0 288 70.1
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 1.6e-98 363.6 285 69.1
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 2.7e-98 362.8 291 67.4
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 2.7e-98 362.8 288 67.0
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 3.5e-98 362.5 292 66.8
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 4.6e-98 362.1 288 67.0
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 6.0e-98 361.7 283 68.2
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 7.9e-98 361.3 288 67.0
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 1.3e-97 360.5 290 66.9
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 1.8e-97 360.1 342 61.4
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 1.8e-97 360.1 332 60.5
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 3.0e-97 359.4 288 67.4
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 3.9e-97 359.0 288 66.0
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 6.7e-97 358.2 290 66.9
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 8.7e-97 357.8 290 67.2
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.9e-96 356.7 289 67.8
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 3.3e-96 355.9 286 66.1
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 5.6e-96 355.1 292 66.1
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 2.1e-95 353.2 314 63.1
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 3.7e-95 352.4 290 65.5
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 4.8e-95 352.1 290 65.2
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 1.1e-94 350.9 288 67.0
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 1.2e-93 347.4 291 63.6
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 4.5e-93 345.5 294 63.9
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 9.9e-93 344.4 293 65.2
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 1.7e-92 343.6 318 59.7
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 1.7e-92 343.6 282 64.5
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 1.7e-92 343.6 294 62.6
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 2.2e-92 343.2 291 62.9
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 2.2e-92 343.2 289 64.0
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 6.4e-92 341.7 290 64.5
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 8.4e-92 341.3 291 61.9
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 1.9e-91 340.1 315 59.7
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 3.2e-91 339.3 292 62.7
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 4.2e-91 339.0 287 62.7
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 4.2e-91 339.0 284 63.0
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 7.1e-91 338.2 287 63.1
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 1.6e-90 337.0 291 62.2
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 1.6e-90 337.0 283 64.7
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 3.5e-90 335.9 338 56.2
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.0e-89 334.3 289 62.6
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 5.1e-89 332.0 334 57.8
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 1.8e-86 323.6 316 58.2
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 3.1e-86 322.8 290 62.4
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 2.6e-85 319.7 292 59.9
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 3.8e-84 315.8 292 58.9
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 8.4e-84 314.7 289 59.2
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 2.5e-83 313.2 348 52.3
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 2.1e-82 310.1 387 49.9
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 3.5e-82 309.3 294 57.1
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 1.0e-81 307.8 288 59.7
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 6.7e-81 305.1 290 60.7
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 8.7e-81 304.7 291 59.5
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 7.4e-80 301.6 266 61.7
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.1e-78 297.7 217 71.0
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 1.4e-75 287.3 218 67.9
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 2.1e-74 283.5 257 61.1
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 6.1e-74 282.0 207 66.7
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 6.1e-74 282.0 223 65.9
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 1.0e-73 281.2 289 56.4
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 1.1e-72 277.7 277 59.6
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.5e-72 277.3 249 58.2
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 3.3e-72 276.2 290 56.2
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 1.7e-71 273.9 201 71.1
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 4.5e-69 265.8 308 52.3
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 2.2e-68 263.5 204 65.7
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 3.8e-68 262.7 274 51.5
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 5.5e-67 258.8 284 54.9
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 3.6e-66 256.1 302 47.4
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 6.1e-66 255.4 253 56.1
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 1.0e-65 254.6 217 66.8
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 2.3e-65 253.4 285 50.2
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.1e-64 251.1 219 65.3
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 1.1e-64 251.1 296 50.0
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.8e-62 243.8 220 64.5
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 2.4e-62 243.4 204 63.7
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 2.4e-62 243.4 205 63.9
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 3.1e-62 243.0 206 65.0
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 1.4e-59 234.2 205 61.0
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 1.5e-56 224.2 299 46.5
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 5.7e-56 222.2 358 40.5
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 9.7e-56 221.5 281 48.0
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 4.1e-54 216.1 180 62.8
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 9.1e-54 214.9 312 41.3
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 1.2e-53 214.5 222 51.4
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 1.7e-52 210.7 318 44.0
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 3.6e-50 203.0 175 63.4
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 2.4e-46 190.3 223 55.6
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 7.7e-45 185.3 329 39.2
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 9.4e-43 178.3 247 51.8
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 7.0e-38 162.2 139 63.3
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 5.9e-37 159.1 324 35.5
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 2.0e-29 134.0 260 37.3
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 3.6e-26 123.2 85 65.9
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 6.4e-23 112.5 86 66.3
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 1.4e-22 111.3 105 58.1
Psat3g079760 Pisum sativum HOM05D004518 ORTHO05D005434 1.4e-14 84.7 79 62.0
TAR369G0459 Trochodendron aralioides HOM05D004518 ORTHO05D005434 1.4e-14 84.7 100 51.0
FAN02G0789 Fragaria x ananassa HOM05D004518 ORTHO05D011253 6.0e-13 79.3 56 69.6
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 2.3e-12 77.4 272 28.7
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 1.2e-08 65.1 56 57.1


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