Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p01480 Brassica napus HOM05D011097 ORTHO05D012775 6.1e-97 357.5 178 100.0
BolC4t21802H Brassica oleracea HOM05D011097 ORTHO05D012775 1.6e-76 289.7 158 91.1
A05p01330 Brassica napus HOM05D011097 ORTHO05D012775 3.1e-48 195.7 165 69.7
BraA05t19131Z Brassica rapa HOM05D011097 ORTHO05D012775 5.5e-45 184.9 166 67.5
Thhalv10001729m.g Eutrema salsugineum HOM05D011097 ORTHO05D012775 1.1e-42 177.2 157 65.6
Sp4g28460 Schrenkiella parvula HOM05D011097 ORTHO05D012775 9.0e-40 167.5 155 60.0
AL4G45770 Arabidopsis lyrata HOM05D011097 ORTHO05D012775 3.5e-36 155.6 157 55.4
BcaC02g12527 Brassica carinata HOM05D011097 ORTHO05D012775 1.3e-35 153.7 148 60.1
C04p01470 Brassica napus HOM05D011097 ORTHO05D012775 1.8e-35 153.3 148 60.1
BcaC02g12528 Brassica carinata HOM05D011097 ORTHO05D012775 1.3e-33 147.1 105 75.2
C04p01510 Brassica napus HOM05D011097 ORTHO05D012775 1.3e-33 147.1 105 75.2
BcaC02g12529 Brassica carinata HOM05D011097 ORTHO05D012775 7.9e-28 127.9 94 74.5
AT2G46455 Arabidopsis thaliana HOM05D011097 ORTHO05D012775 1.8e-27 126.7 155 51.6
BolC4t21801H Brassica oleracea HOM05D011097 ORTHO05D012775 7.7e-15 84.7 93 53.8
AL2G13980 Arabidopsis lyrata HOM05D011097 ORTHO05D012775 1.4e-13 80.5 92 57.6
THA.LOC104817356 Tarenaya hassleriana HOM05D002290 ORTHO05D012775 7.2e-13 78.2 163 38.7
THA.LOC104817347 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 1.4e-11 73.9 134 40.3
BcaB03g13955 Brassica carinata HOM05D011097 ORTHO05D012775 2.3e-11 73.2 65 67.7
THA.LOC104817352 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 8.8e-11 71.2 158 36.7
THA.LOC104817353 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 4.8e-09 65.5 161 37.9
THA.LOC104817358 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 3.5e-07 59.3 99 32.3
Sp4g28470 Schrenkiella parvula HOM05D002290 ORTHO05D002532 1.7e-06 57.0 133 30.8
BraA03t11780Z Brassica rapa HOM05D002290 ORTHO05D002532 2.9e-06 56.2 115 34.8
CARHR141770 Cardamine hirsuta HOM05D002290 ORTHO05D002532 2.9e-06 56.2 136 32.4
BcaB01g03216 Brassica carinata HOM05D002290 ORTHO05D002532 3.8e-06 55.8 127 29.9
AL4G45780 Arabidopsis lyrata HOM05D002290 ORTHO05D002532 5.0e-06 55.5 98 32.7


User provided reference genes

Program Settings