Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p01460 Brassica napus HOM05D002290 ORTHO05D042395 1.2e-30 136.0 74 100.0
BolC4t21800H Brassica oleracea HOM05D002290 ORTHO05D042395 1.3e-29 132.5 74 98.6
Sp4g28470 Schrenkiella parvula HOM05D002290 ORTHO05D002532 1.0e-21 106.3 73 84.9
BcaC01g05067 Brassica carinata HOM05D002290 ORTHO05D002532 8.1e-19 96.7 80 75.0
BolC3t15411H Brassica oleracea HOM05D002290 ORTHO05D002532 8.1e-19 96.7 80 75.0
C03p30610 Brassica napus HOM05D002290 ORTHO05D002532 2.4e-18 95.1 80 73.8
AL4G45780 Arabidopsis lyrata HOM05D002290 ORTHO05D002532 4.0e-18 94.4 72 75.0
CARHR141770 Cardamine hirsuta HOM05D002290 ORTHO05D002532 5.3e-18 94.0 73 75.3
Carub.0004s2915 Capsella rubella HOM05D002290 ORTHO05D002532 1.5e-17 92.4 73 75.3
AT2G46470 Arabidopsis thaliana HOM05D002290 ORTHO05D002532 2.6e-17 91.7 71 76.1
A03p25650 Brassica napus HOM05D002290 ORTHO05D002532 5.8e-17 90.5 80 70.0
BraA03t11780Z Brassica rapa HOM05D002290 ORTHO05D002532 5.8e-17 90.5 80 70.0
Thhalv10001727m.g Eutrema salsugineum HOM05D002290 ORTHO05D002532 9.9e-17 89.7 72 79.2
BcaB01g03216 Brassica carinata HOM05D002290 ORTHO05D002532 9.3e-15 83.2 86 62.8
Aa31LG1G27790 Aethionema arabicum HOM05D002290 ORTHO05D002532 3.1e-10 68.2 70 64.3
THA.LOC104817358 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 6.0e-06 53.9 69 50.7
THA.LOC104827625 Tarenaya hassleriana HOM05D002290 ORTHO05D002532 6.0e-06 53.9 64 57.8
BcaC05g27059 Brassica carinata HOM05D008043 ORTHO05D010395 7.9e-06 53.5 78 51.3
C05p29180 Brassica napus HOM05D033960 ORTHO05D027910 7.9e-06 53.5 47 63.8


User provided reference genes

Program Settings