Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 3.9e-304 1047.3 539 100.0
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 3.9e-304 1047.3 539 100.0
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 7.4e-303 1043.1 539 99.3
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 2.6e-300 1034.6 539 98.5
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 4.5e-284 980.7 541 92.2
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 3.2e-282 974.5 541 91.9
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 5.5e-282 973.8 539 90.9
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 7.2e-282 973.4 539 91.3
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 5.9e-276 953.7 540 90.2
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 1.7e-270 935.6 539 88.3
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 2.9e-259 898.3 540 87.4
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.4e-256 889.4 539 82.4
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 2.7e-249 865.1 543 81.2
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 1.3e-219 766.5 549 70.9
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 1.1e-218 763.5 545 71.6
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 1.5e-218 763.1 531 72.9
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 4.7e-217 758.1 550 69.8
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 6.2e-217 757.7 545 70.8
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 1.8e-216 756.1 547 71.1
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 6.8e-216 754.2 532 72.9
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 1.5e-215 753.1 529 72.6
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 2.6e-215 752.3 547 71.3
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 2.6e-215 752.3 529 72.2
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 5.8e-215 751.1 529 72.0
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 6.4e-214 747.7 540 70.4
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 4.1e-213 745.0 543 70.0
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 7.1e-213 744.2 544 70.4
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 9.2e-213 743.8 531 71.8
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 1.2e-212 743.4 539 70.5
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 1.2e-212 743.4 532 70.7
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 3.5e-212 741.9 531 71.2
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 3.5e-212 741.9 530 71.3
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 3.5e-212 741.9 529 70.9
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 4.6e-212 741.5 543 70.0
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 4.6e-212 741.5 544 69.5
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 6.0e-212 741.1 529 70.7
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 6.0e-212 741.1 545 69.7
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 1.0e-211 740.3 541 69.9
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 1.3e-211 740.0 529 71.3
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 1.7e-211 739.6 532 70.9
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 3.0e-211 738.8 536 70.0
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 8.6e-211 737.3 532 70.5
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 1.1e-210 736.9 522 72.8
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.1e-210 736.9 544 68.9
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 1.9e-210 736.1 525 71.0
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 1.9e-210 736.1 528 70.5
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 4.3e-210 734.9 544 68.9
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 1.6e-209 733.0 531 70.2
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 1.6e-209 733.0 528 70.5
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 1.1e-208 730.3 522 70.7
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.4e-208 729.9 527 70.2
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.8e-208 729.6 531 70.6
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 3.1e-208 728.8 529 71.3
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 5.2e-208 728.0 530 71.3
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 6.8e-208 727.6 544 69.7
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 1.5e-207 726.5 550 68.4
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 2.6e-207 725.7 534 68.2
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 4.4e-207 724.9 544 68.8
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 4.4e-207 724.9 523 70.0
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 2.9e-206 722.2 532 69.5
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 2.9e-206 722.2 528 70.6
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 3.8e-206 721.8 531 68.5
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 3.8e-206 721.8 545 67.2
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 4.9e-206 721.5 580 66.0
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 4.9e-206 721.5 540 69.3
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 4.9e-206 721.5 545 67.5
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 1.9e-205 719.5 588 65.0
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 5.4e-205 718.0 527 69.4
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 2.1e-204 716.1 521 70.2
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 2.7e-204 715.7 527 69.4
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 1.3e-203 713.4 531 69.3
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 5.1e-203 711.4 528 67.4
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 6.6e-203 711.1 545 68.3
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 5.6e-202 708.0 525 69.1
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 1.4e-200 703.4 559 65.1
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 5.2e-200 701.4 521 68.5
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 5.2e-200 701.4 521 68.7
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 3.4e-199 698.7 525 66.1
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 4.4e-199 698.4 492 72.8
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 1.4e-197 693.3 525 68.8
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 1.7e-195 686.4 541 65.6
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 5.1e-195 684.9 563 64.3
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 6.6e-195 684.5 557 64.5
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 1.5e-194 683.3 528 66.1
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 1.9e-194 682.9 526 67.7
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 4.3e-194 681.8 519 68.0
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 4.3e-194 681.8 539 66.0
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.5e-191 673.3 487 70.6
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 3.4e-191 672.2 527 64.9
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 7.1e-189 664.5 474 70.9
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 3.0e-187 659.1 495 67.9
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 5.8e-183 644.8 488 68.2
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 6.2e-177 624.8 534 61.8
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 2.5e-170 602.8 550 60.0
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 8.2e-169 597.8 521 61.6
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 5.3e-168 595.1 583 57.1
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 6.7e-163 578.2 438 67.4
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 5.9e-159 565.1 410 70.0
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.0e-158 564.3 409 70.4
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.5e-117 427.6 559 46.5
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 4.4e-114 416.0 546 46.7
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 9.2e-112 408.3 355 62.8
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 1.9e-109 400.6 534 42.9
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 3.6e-108 396.4 537 43.2
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 3.6e-108 396.4 547 41.1
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 6.6e-102 375.6 540 38.9
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 1.9e-101 374.0 552 40.6
ATR0706G014 Amborella trichopoda HOM05D005743 ORTHO05D007031 3.3e-101 373.2 282 68.8
Gohir.A11G114301 Gossypium hirsutum HOM05D005743 ORTHO05D007031 1.4e-99 367.9 274 67.9
Hund18173 Selenicereus undatus HOM05D005743 ORTHO05D007031 1.4e-99 367.9 263 73.0
Zm00001eb165450 Zea mays HOM05D005743 ORTHO05D007031 2.6e-98 363.6 324 62.0
CiPaw.08G094900 Carya illinoinensis HOM05D005743 ORTHO05D007031 2.2e-97 360.5 294 62.9
THA.LOC104798829 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.5e-85 321.2 190 84.7
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 9.6e-85 318.5 426 43.7
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 3.8e-73 280.0 635 31.3
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 3.8e-65 253.4 225 60.9
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 3.2e-64 250.4 316 48.7
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 9.7e-53 212.2 162 67.9
EL10Ac3g06395 Beta vulgaris HOM05D005743 ORTHO05D007031 1.1e-51 208.8 152 67.1
Nitab4.5_0002433g0030 Nicotiana tabacum HOM05D005743 ORTHO05D007031 4.1e-51 206.8 286 44.8
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 6.7e-46 189.5 706 28.3
Actinidia21045 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.5e-45 188.3 128 73.4
Zm00001eb407450 Zea mays HOM05D005743 ORTHO05D007031 7.4e-45 186.0 123 74.0
SEGI_13510 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 1.1e-40 172.2 115 70.4
Rhsim05G0173900 Rhododendron simsii HOM05D005743 ORTHO05D007031 3.1e-35 154.1 131 59.5
Actinidia21044 Actinidia chinensis HOM05D005743 ORTHO05D007031 3.3e-29 134.0 94 63.8
Nitab4.5_0002433g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.4e-27 128.6 97 64.9
Cre11.g479600 Chlamydomonas reinhardtii HOM05D005743 ORTHO05D007031 7.2e-24 116.3 185 38.4
Glyma.02G017550 Glycine max HOM05D005743 ORTHO05D007031 9.4e-24 115.9 59 89.8
SEGI_31813 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 1.9e-16 91.7 89 56.2
ATR0706G260 Amborella trichopoda HOM05D005743 ORTHO05D007031 4.7e-15 87.0 51 82.4
SEGI_40223 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 4.0e-14 84.0 90 52.2
BcaC02g12599 Brassica carinata HOM05D005743 ORTHO05D007031 1.7e-09 68.6 38 89.5
PRCOL_00000753 Prasinoderma coloniale HOM05D018879 ORTHO05D018932 1.5e-08 65.5 159 29.6
Medtr7g112660 Medicago truncatula HOM05D005743 ORTHO05D007031 4.2e-08 63.9 52 67.3
MCO02G055 Micromonas commoda HOM05D018879 ORTHO05D018932 2.3e-06 58.2 191 29.8
Medtr3g062620 Medicago truncatula HOM05D005743 ORTHO05D007031 8.9e-06 56.2 40 72.5
MCO03G398 Micromonas commoda HOM05D018879 ORTHO05D018932 8.9e-06 56.2 114 33.3


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