Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 1.5e-237 825.9 435 100.0
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 4.8e-228 794.3 450 91.6
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 2.0e-221 772.3 431 95.4
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 2.4e-219 765.4 430 91.2
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 1.2e-199 699.9 438 84.7
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 5.9e-194 681.0 442 80.1
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 3.6e-191 671.8 440 79.5
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 1.4e-190 669.8 438 79.7
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 5.6e-184 647.9 426 77.9
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 4.7e-183 644.8 414 81.4
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.5e-176 623.2 421 76.0
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 2.9e-164 582.4 335 91.9
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 2.7e-162 575.9 443 70.4
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 2.1e-159 566.2 424 68.4
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 8.1e-159 564.3 432 69.4
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 1.1e-158 563.9 436 67.7
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.4e-158 563.5 433 66.7
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 1.4e-158 563.5 425 69.4
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 3.1e-158 562.4 425 68.0
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 6.8e-158 561.2 443 67.3
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.6e-157 559.3 423 67.6
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 4.4e-157 558.5 428 68.5
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 4.4e-157 558.5 426 68.3
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 4.4e-157 558.5 431 67.7
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 9.9e-157 557.4 433 66.3
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 9.9e-157 557.4 438 66.4
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.7e-156 556.6 421 68.4
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 2.2e-156 556.2 438 66.4
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 4.9e-156 555.1 429 67.1
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 6.4e-156 554.7 411 68.9
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.4e-155 553.5 438 66.0
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 2.4e-155 552.7 420 69.5
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 9.2e-155 550.8 439 66.5
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.1e-154 549.7 438 66.0
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 2.1e-154 549.7 425 67.3
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 3.5e-154 548.9 442 66.7
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 6.0e-154 548.1 415 67.5
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 6.0e-154 548.1 444 65.1
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 1.7e-153 546.6 426 66.4
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 3.0e-153 545.8 440 65.0
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 5.1e-153 545.0 431 65.4
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 8.7e-153 544.3 428 65.4
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-152 543.9 427 65.3
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 1.9e-152 543.1 446 65.0
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 1.9e-152 543.1 440 64.1
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 4.3e-152 542.0 427 67.9
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 4.3e-152 542.0 425 66.1
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 5.6e-152 541.6 446 64.6
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 7.3e-152 541.2 425 65.9
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 1.6e-151 540.0 440 65.5
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 2.1e-151 539.7 434 65.0
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 2.1e-151 539.7 431 64.5
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 2.1e-151 539.7 428 65.7
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.8e-151 539.3 418 66.3
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 4.8e-151 538.5 431 65.0
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 6.2e-151 538.1 415 67.7
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 1.4e-150 537.0 428 65.2
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 1.8e-150 536.6 398 69.6
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 1.8e-150 536.6 406 69.2
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 1.8e-150 536.6 428 64.5
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 2.4e-150 536.2 440 64.1
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 4.0e-150 535.4 441 63.3
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 4.0e-150 535.4 413 66.8
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 5.3e-150 535.0 416 66.8
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 6.9e-150 534.6 330 82.7
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 9.0e-150 534.3 443 63.4
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.2e-149 533.9 420 67.1
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 4.4e-149 531.9 415 66.7
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 3.2e-147 525.8 424 65.1
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 1.3e-145 520.4 405 67.2
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 3.0e-145 519.2 401 67.6
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 3.9e-145 518.8 396 65.7
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.1e-144 517.3 411 63.5
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 9.6e-144 514.2 408 65.0
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.6e-143 513.5 426 66.0
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 1.6e-143 513.5 448 62.7
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.1e-143 513.1 431 64.7
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 4.8e-143 511.9 426 62.4
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.8e-142 510.0 425 62.6
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 6.9e-142 508.1 401 65.3
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 1.5e-141 506.9 414 64.3
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 2.6e-141 506.1 531 53.9
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 1.1e-139 500.7 418 63.4
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.1e-138 496.5 425 60.7
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 3.5e-138 495.7 495 54.9
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 5.1e-137 491.9 384 65.6
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 1.8e-134 483.4 425 59.8
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 4.0e-134 482.3 377 63.9
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 4.5e-133 478.8 409 62.3
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 4.5e-133 478.8 409 62.3
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 7.6e-133 478.0 396 64.9
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.0e-132 477.6 385 66.0
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.0e-129 467.6 405 60.2
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 1.3e-129 467.2 351 70.1
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.1e-123 447.6 363 66.1
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 4.6e-122 442.2 328 68.3
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 2.2e-119 433.3 431 54.8
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 2.2e-116 423.3 398 56.5
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 5.1e-113 412.1 425 54.8
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 5.5e-107 392.1 421 54.4
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 4.1e-102 375.9 398 52.3
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.3e-102 375.6 304 61.2
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 2.2e-95 353.6 324 65.1
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.9e-91 340.5 257 69.3
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 9.1e-86 321.6 389 48.1
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.0e-84 315.8 346 54.0
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.9e-75 287.3 225 70.7
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 6.8e-73 278.9 219 70.3
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 8.3e-71 271.9 388 45.4
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 4.1e-70 269.6 219 60.3
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 4.0e-65 253.1 388 41.5
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.3e-43 179.9 151 62.9
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 2.0e-40 171.0 121 71.1
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.0e-36 157.1 113 69.9
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.5e-35 154.1 135 62.2
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 2.1e-34 151.0 89 84.3
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.1e-34 151.0 89 84.3
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.6e-34 150.2 135 61.5
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.3e-33 146.4 131 59.5
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.2e-30 136.7 108 68.5
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 6.6e-28 129.4 100 64.0
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 1.5e-24 118.2 69 79.7
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 2.4e-22 110.9 69 76.8
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 5.5e-22 109.8 129 55.8
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.1e-22 109.4 101 51.5
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 6.0e-21 106.3 131 55.7
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 3.7e-18 97.1 66 60.6
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 2.4e-17 94.4 78 60.3
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 6.7e-12 76.3 43 76.7
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 5.7e-11 73.2 41 78.0
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 8.2e-10 69.3 41 75.6
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 2.4e-09 67.8 224 34.8
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 8.4e-07 59.3 43 67.4


User provided reference genes

Program Settings