Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p92800 Brassica napus HOM05D007392 ORTHO05D009181 6.6e-70 267.3 141 100.0
BcaC01g01528 Brassica carinata HOM05D007392 ORTHO05D009181 4.8e-44 181.4 107 86.0
BolC3t21586H Brassica oleracea HOM05D007392 ORTHO05D009181 4.8e-44 181.4 107 86.0
A08p00640 Brassica napus HOM05D007392 ORTHO05D009181 3.3e-37 158.7 90 91.1
BraA08t32122Z Brassica rapa HOM05D007392 ORTHO05D009181 3.3e-37 158.7 90 91.1
BcaB04g16956 Brassica carinata HOM05D005410 ORTHO05D009181 2.8e-28 129.0 105 71.4
Carub.0001s4396 Capsella rubella HOM05D007392 ORTHO05D009181 3.9e-22 108.6 114 63.2
AL1G63490 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 5.1e-22 108.2 112 59.8
Sp1g41080 Schrenkiella parvula HOM05D007392 ORTHO05D009181 5.1e-22 108.2 101 64.4
AT1G55475 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 2.0e-21 106.3 111 59.5
Thhalv10011881m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 6.3e-20 101.3 96 64.6
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 6.5e-17 91.3 92 63.0
Aa31LG10G780 Aethionema arabicum HOM05D007392 ORTHO05D009181 1.1e-13 80.5 97 56.7
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 1.5e-13 80.1 94 53.2
CARHR045140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 2.0e-13 79.7 80 62.5
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 1.7e-12 76.6 94 52.1
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 3.7e-12 75.5 107 53.3
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 1.1e-11 73.9 94 55.3
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 1.1e-11 73.9 94 55.3
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 1.4e-11 73.6 82 56.1
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 1.4e-11 73.6 62 66.1
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 3.1e-11 72.4 99 53.5
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 4.1e-11 72.0 100 53.0
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 5.3e-11 71.6 101 49.5
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 7.0e-11 71.2 62 67.7
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 1.6e-10 70.1 97 51.5
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 1.6e-10 70.1 62 67.7
C03p46410 Brassica napus HOM05D007392 ORTHO05D009181 4.5e-10 68.6 44 77.3
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 5.9e-10 68.2 103 46.6
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 2.9e-09 65.9 105 45.7
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 6.5e-09 64.7 59 59.3
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.1e-08 63.9 94 50.0
BolC6t36112H Brassica oleracea HOM05D007392 ORTHO05D042614 1.5e-08 63.5 42 81.0
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.9e-08 63.2 85 49.4
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 4.2e-08 62.0 61 60.7
BcaC01g01527 Brassica carinata HOM05D004141 ORTHO05D009181 5.5e-08 61.6 27 100.0
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 5.5e-08 61.6 59 59.3
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 9.4e-08 60.8 91 46.2
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 2.1e-07 59.7 66 54.5
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 2.7e-07 59.3 76 51.3
BcaNung05740 Brassica carinata HOM05D000708 ORTHO05D001418 3.6e-07 58.9 41 75.6
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 6.1e-07 58.2 87 40.2
C06p10360 Brassica napus HOM05D007392 ORTHO05D042614 8.0e-07 57.8 68 57.4
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.4e-06 57.0 60 53.3
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 1.8e-06 56.6 64 56.2
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.8e-06 56.6 92 40.2
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 1.8e-06 56.6 87 39.1
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 1.8e-06 56.6 80 47.5
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 4.0e-06 55.5 85 38.8
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 6.7e-06 54.7 84 39.3
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 6.7e-06 54.7 91 41.8
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.7e-06 54.7 91 41.8
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 6.7e-06 54.7 60 53.3


User provided reference genes

Program Settings