Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.6e-124 449.5 237 100.0
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 8.7e-107 390.6 216 97.2
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 6.0e-100 367.9 209 93.3
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 1.7e-86 323.2 173 94.2
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.3e-81 307.0 174 89.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.3e-81 307.0 174 89.7
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 9.1e-72 274.2 229 67.7
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 3.5e-71 272.3 183 77.6
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 2.2e-70 269.6 184 76.6
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 2.9e-70 269.2 184 76.1
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 3.7e-65 252.3 181 73.5
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 4.1e-56 222.2 186 62.9
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 8.6e-38 161.4 187 50.8
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 3.6e-36 156.0 175 50.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 3.6e-36 156.0 175 53.1
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.7e-36 155.6 175 52.0
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 6.2e-36 155.2 150 53.3
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.1e-35 154.5 170 51.2
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 1.4e-35 154.1 185 48.6
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 1.8e-35 153.7 174 51.1
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 3.1e-35 152.9 187 50.3
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 5.2e-35 152.1 132 53.0
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.5e-34 150.6 176 49.4
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.4e-34 149.4 153 52.9
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 3.4e-34 149.4 146 56.2
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 7.5e-34 148.3 152 53.3
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 9.8e-34 147.9 189 47.1
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 1.3e-33 147.5 150 50.0
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 3.7e-33 146.0 151 51.0
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 8.3e-33 144.8 148 52.0
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 8.3e-33 144.8 193 45.6
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 1.1e-32 144.4 72 95.8
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.4e-32 144.1 193 46.1
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.4e-32 144.1 193 46.1
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.9e-32 143.7 180 47.2
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 2.4e-32 143.3 193 46.6
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 7.1e-32 141.7 138 55.1
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 9.2e-32 141.4 187 47.1
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.6e-31 140.6 189 45.0
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 2.1e-31 140.2 166 48.8
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 2.1e-31 140.2 155 50.3
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 2.1e-31 140.2 174 46.0
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 2.7e-31 139.8 143 53.1
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.7e-31 139.8 137 52.6
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 3.5e-31 139.4 163 47.9
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 7.8e-31 138.3 145 50.3
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 7.8e-31 138.3 154 50.6
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 1.0e-30 137.9 156 48.1
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.0e-30 137.9 143 49.7
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 1.3e-30 137.5 183 45.4
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 3.0e-30 136.3 150 50.0
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 5.1e-30 135.6 145 51.7
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 6.6e-30 135.2 154 49.4
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 1.1e-29 134.4 145 49.7
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 1.9e-29 133.7 178 44.4
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.9e-29 133.7 178 44.4
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 3.3e-29 132.9 160 45.6
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 3.3e-29 132.9 130 53.8
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 4.3e-29 132.5 175 44.0
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 7.3e-29 131.7 148 45.3
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 9.5e-29 131.3 180 43.9
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.2e-28 131.0 163 44.8
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 1.2e-28 131.0 145 48.3
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 1.2e-28 131.0 137 46.7
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.2e-28 131.0 187 43.9
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.6e-28 130.6 134 52.2
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.6e-28 130.6 152 50.0
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 3.6e-28 129.4 165 41.2
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 3.6e-28 129.4 165 41.2
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 4.7e-28 129.0 169 43.8
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 8.1e-28 128.3 112 58.9
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.1e-27 127.9 135 46.7
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 1.8e-27 127.1 188 41.5
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 2.3e-27 126.7 173 42.2
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 2.3e-27 126.7 129 54.3
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.3e-27 126.7 129 53.5
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 3.1e-27 126.3 165 42.4
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 5.2e-27 125.6 127 53.5
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 8.9e-27 124.8 133 48.1
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.2e-26 124.4 79 77.2
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.2e-26 124.4 127 53.5
BolC3t17460H Brassica oleracea HOM05D006726 ORTHO05D008328 1.5e-26 124.0 95 71.6
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.0e-26 123.6 129 53.5
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 1.3e-25 120.9 148 41.9
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 2.2e-25 120.2 100 62.0
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.2e-24 116.3 150 45.3
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.2e-24 114.8 125 50.4
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.2e-24 114.8 125 50.4
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 9.2e-24 114.8 140 46.4
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 2.7e-23 113.2 102 52.0
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 2.7e-23 113.2 99 56.6
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.3e-22 110.9 183 41.0
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 3.9e-22 109.4 105 52.4
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 6.6e-22 108.6 139 44.6
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 4.3e-21 105.9 102 51.0
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 9.6e-21 104.8 177 41.2
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 3.6e-20 102.8 131 45.0
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 1.4e-19 100.9 122 42.6
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.5e-18 97.4 50 98.0
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.0e-18 97.1 116 48.3
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 3.4e-18 96.3 150 36.7
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.3e-17 94.4 142 42.3
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 8.4e-17 91.7 90 55.6
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.4e-11 74.3 156 36.5
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 1.8e-11 73.9 143 34.3
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 9.0e-11 71.6 97 39.2
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 7.6e-10 68.6 88 39.8
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 1.9e-08 63.9 91 33.0
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.7e-07 60.1 174 33.3


User provided reference genes

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