Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p90790 Brassica napus HOM05D009470 ORTHO05D014132 1.8e-108 396.0 206 100.0
C03p90770 Brassica napus HOM05D009470 ORTHO05D014132 1.6e-104 382.9 206 96.6
C03p90750 Brassica napus HOM05D009470 ORTHO05D014132 1.3e-98 363.2 206 92.2
BolC3t21400H Brassica oleracea HOM05D009470 ORTHO05D014132 5.4e-97 357.8 206 90.8
C03p90760 Brassica napus HOM05D009470 ORTHO05D014132 1.2e-96 356.7 206 90.8
A08p02040 Brassica napus HOM05D009470 ORTHO05D014132 9.3e-81 303.9 200 83.0
C03p90810 Brassica napus HOM05D009470 ORTHO05D014132 1.6e-80 303.1 178 88.2
A08p01990 Brassica napus HOM05D009470 ORTHO05D014132 5.1e-79 298.1 206 78.6
A08p02100 Brassica napus HOM05D009470 ORTHO05D014132 8.7e-79 297.4 206 79.6
A08p02070 Brassica napus HOM05D009470 ORTHO05D014132 2.5e-78 295.8 206 79.1
BraA08t32254Z Brassica rapa HOM05D009470 ORTHO05D014132 1.3e-77 293.5 206 78.2
A08p02000 Brassica napus HOM05D009470 ORTHO05D014132 1.1e-76 290.4 200 79.0
BraA08t32252Z Brassica rapa HOM05D009470 ORTHO05D014132 6.9e-76 287.7 206 77.7
A08p01980 Brassica napus HOM05D009470 ORTHO05D014132 2.1e-72 276.2 206 75.2
BraA08t32253Z Brassica rapa HOM05D009470 ORTHO05D107828 3.7e-61 238.8 163 78.5
A08p02110 Brassica napus HOM05D009470 ORTHO05D011185 3.1e-52 209.1 202 61.4
A08p02030 Brassica napus HOM05D009470 ORTHO05D011185 4.1e-52 208.8 202 61.4
A08p02090 Brassica napus HOM05D009470 ORTHO05D011185 4.1e-52 208.8 202 61.4
BraA08t32257Z Brassica rapa HOM05D009470 ORTHO05D011185 9.1e-52 207.6 202 61.4
A08p02010 Brassica napus HOM05D009470 ORTHO05D097375 1.6e-51 206.8 157 73.9
BolC3t21398H Brassica oleracea HOM05D009470 ORTHO05D014132 4.2e-49 198.7 110 90.9
BcaB04g17149 Brassica carinata HOM05D009470 ORTHO05D011185 1.0e-47 194.1 219 56.2
BcaC01g01332 Brassica carinata HOM05D009470 ORTHO05D011185 9.4e-41 171.0 193 54.4
C03p90740 Brassica napus HOM05D009470 ORTHO05D011185 1.6e-40 170.2 202 53.0
BcaC01g01333 Brassica carinata HOM05D009470 ORTHO05D011185 2.0e-38 163.3 202 51.0
BolC3t21395H Brassica oleracea HOM05D009470 ORTHO05D011185 2.0e-38 163.3 202 51.0
BraA08t32255Z Brassica rapa HOM05D009470 ORTHO05D108174 4.8e-37 158.7 94 86.2
BcaB04g17512 Brassica carinata HOM05D000081 ORTHO05D011185 1.9e-33 146.7 219 43.8
A08p02060 Brassica napus HOM05D009470 ORTHO05D011185 1.6e-32 143.7 115 67.0
C03p92950 Brassica napus HOM05D000081 ORTHO05D011185 1.0e-31 141.0 196 50.0
BolC3t21600H Brassica oleracea HOM05D000081 ORTHO05D011185 1.4e-31 140.6 196 50.0
BcaC01g01543 Brassica carinata HOM05D000081 ORTHO05D011185 5.2e-31 138.7 196 50.0
Thhalv10012199m.g Eutrema salsugineum HOM05D000081 ORTHO05D011185 4.9e-29 132.1 189 49.2
BolC3t21393H Brassica oleracea HOM05D009470 ORTHO05D011185 1.4e-28 130.6 102 67.6
BraA08t32101Z Brassica rapa HOM05D000081 ORTHO05D011185 1.4e-28 130.6 196 48.0
A08p00450 Brassica napus HOM05D000081 ORTHO05D011185 1.8e-28 130.2 196 48.0
BcaB04g16947 Brassica carinata HOM05D000081 ORTHO05D011185 3.5e-27 125.9 200 45.5
BcaB08g35253 Brassica carinata HOM05D010124 ORTHO05D011880 1.4e-23 114.0 102 60.8
BcaC08g43638 Brassica carinata HOM05D000081 ORTHO05D024202 5.2e-23 112.1 193 44.6
C06p10540 Brassica napus HOM05D000081 ORTHO05D024202 2.6e-22 109.8 193 43.0
BolC6t36134H Brassica oleracea HOM05D000081 ORTHO05D024202 2.6e-22 109.8 193 43.0
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 1.4e-20 104.0 202 38.1
AL1G63660 Arabidopsis lyrata HOM05D000081 ORTHO05D011185 3.2e-20 102.8 178 41.0
AT1G55600 Arabidopsis thaliana HOM05D000081 ORTHO05D011185 2.0e-19 100.1 179 40.8
Sp1g41220 Schrenkiella parvula HOM05D000081 ORTHO05D011185 4.6e-19 99.0 203 38.9
A06p00110 Brassica napus HOM05D000081 ORTHO05D024202 6.0e-19 98.6 193 40.4
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 1.0e-18 97.8 196 39.8
BraA06t23229Z Brassica rapa HOM05D000081 ORTHO05D024202 1.3e-18 97.4 193 40.9
BcaB05g24088 Brassica carinata HOM05D000081 ORTHO05D011185 1.5e-17 94.0 187 41.7
Carub.0001s4412 Capsella rubella HOM05D000081 ORTHO05D011185 4.7e-16 89.0 194 36.1
BcaB08g35252 Brassica carinata HOM05D009470 ORTHO05D011185 4.0e-15 85.9 91 59.3
CARHR045300 Cardamine hirsuta HOM05D000081 ORTHO05D011185 1.2e-14 84.3 179 39.7
BcaB02g10810 Brassica carinata HOM05D000081 ORTHO05D011185 2.6e-14 83.2 198 37.4
BraA05t20633Z Brassica rapa HOM05D000081 ORTHO05D011185 1.4e-12 77.4 157 40.1
BolC6t36813H Brassica oleracea HOM05D000081 ORTHO05D011185 3.2e-12 76.3 157 40.8
A05p17370 Brassica napus HOM05D000081 ORTHO05D011185 5.4e-12 75.5 157 39.5
BcaC08g44207 Brassica carinata HOM05D000081 ORTHO05D011185 1.2e-11 74.3 157 40.1
C06p16160 Brassica napus HOM05D000081 ORTHO05D011185 1.2e-11 74.3 157 40.1
BcaB05g24086 Brassica carinata HOM05D000081 ORTHO05D011185 2.1e-08 63.5 183 35.5
BcaB05g24089 Brassica carinata HOM05D000081 ORTHO05D011185 3.6e-08 62.8 111 39.6
C03p90710 Brassica napus HOM05D000081 ORTHO05D011185 3.1e-07 59.7 77 51.9


User provided reference genes

Program Settings