Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p90760 Brassica napus HOM05D009470 ORTHO05D014132 4.3e-110 401.4 206 100.0
BolC3t21400H Brassica oleracea HOM05D009470 ORTHO05D014132 1.5e-107 392.9 206 98.5
C03p90750 Brassica napus HOM05D009470 ORTHO05D014132 4.4e-107 391.3 206 97.6
C03p90770 Brassica napus HOM05D009470 ORTHO05D014132 2.0e-99 365.9 206 93.2
C03p90790 Brassica napus HOM05D009470 ORTHO05D014132 1.2e-96 356.7 206 90.8
C03p90810 Brassica napus HOM05D009470 ORTHO05D014132 4.3e-86 321.6 195 84.6
A08p02070 Brassica napus HOM05D009470 ORTHO05D014132 3.1e-84 315.5 206 83.0
A08p02100 Brassica napus HOM05D009470 ORTHO05D014132 3.1e-84 315.5 206 83.0
BraA08t32254Z Brassica rapa HOM05D009470 ORTHO05D014132 5.3e-84 314.7 206 82.5
A08p01990 Brassica napus HOM05D009470 ORTHO05D014132 3.4e-83 312.0 206 81.6
A08p02000 Brassica napus HOM05D009470 ORTHO05D014132 1.3e-82 310.1 201 82.6
BraA08t32252Z Brassica rapa HOM05D009470 ORTHO05D014132 1.2e-80 303.5 206 81.6
A08p02040 Brassica napus HOM05D009470 ORTHO05D014132 4.6e-80 301.6 200 82.5
A08p01980 Brassica napus HOM05D009470 ORTHO05D014132 1.5e-78 296.6 206 79.6
BraA08t32253Z Brassica rapa HOM05D009470 ORTHO05D107828 1.1e-62 243.8 163 80.4
A08p02010 Brassica napus HOM05D009470 ORTHO05D097375 1.2e-56 223.8 157 78.3
BraA08t32257Z Brassica rapa HOM05D009470 ORTHO05D011185 1.1e-54 217.2 200 63.0
BolC3t21398H Brassica oleracea HOM05D009470 ORTHO05D014132 2.6e-54 216.1 110 96.4
A08p02110 Brassica napus HOM05D009470 ORTHO05D011185 5.7e-54 214.9 200 62.5
A08p02030 Brassica napus HOM05D009470 ORTHO05D011185 7.4e-54 214.5 200 62.5
A08p02090 Brassica napus HOM05D009470 ORTHO05D011185 7.4e-54 214.5 200 62.5
BcaB04g17149 Brassica carinata HOM05D009470 ORTHO05D011185 9.4e-49 197.6 218 55.5
BcaC01g01332 Brassica carinata HOM05D009470 ORTHO05D011185 2.2e-45 186.4 191 57.1
C03p90740 Brassica napus HOM05D009470 ORTHO05D011185 4.1e-44 182.2 200 55.0
BcaC01g01333 Brassica carinata HOM05D009470 ORTHO05D011185 2.9e-42 176.0 200 53.5
BolC3t21395H Brassica oleracea HOM05D009470 ORTHO05D011185 2.9e-42 176.0 200 53.5
BraA08t32255Z Brassica rapa HOM05D009470 ORTHO05D108174 8.3e-37 157.9 94 86.2
Thhalv10012199m.g Eutrema salsugineum HOM05D000081 ORTHO05D011185 1.0e-34 151.0 189 52.9
BcaB04g17512 Brassica carinata HOM05D000081 ORTHO05D011185 2.9e-34 149.4 217 44.7
C03p92950 Brassica napus HOM05D000081 ORTHO05D011185 3.8e-34 149.1 197 49.7
BolC3t21600H Brassica oleracea HOM05D000081 ORTHO05D011185 5.0e-34 148.7 197 49.7
BcaC01g01543 Brassica carinata HOM05D000081 ORTHO05D011185 1.9e-33 146.7 197 49.7
A08p02060 Brassica napus HOM05D009470 ORTHO05D011185 3.3e-33 146.0 115 67.0
BraA08t32101Z Brassica rapa HOM05D000081 ORTHO05D011185 1.2e-30 137.5 197 47.2
A08p00450 Brassica napus HOM05D000081 ORTHO05D011185 1.5e-30 137.1 197 47.2
BolC3t21393H Brassica oleracea HOM05D009470 ORTHO05D011185 1.5e-30 137.1 108 66.7
BcaB04g16947 Brassica carinata HOM05D000081 ORTHO05D011185 6.3e-29 131.7 199 45.7
BcaB08g35253 Brassica carinata HOM05D010124 ORTHO05D011880 6.6e-26 121.7 107 61.7
BcaC08g43638 Brassica carinata HOM05D000081 ORTHO05D024202 6.6e-26 121.7 193 46.1
AL1G63660 Arabidopsis lyrata HOM05D000081 ORTHO05D011185 1.1e-25 120.9 179 45.8
C06p10540 Brassica napus HOM05D000081 ORTHO05D024202 3.3e-25 119.4 193 45.6
BolC6t36134H Brassica oleracea HOM05D000081 ORTHO05D024202 3.3e-25 119.4 193 45.6
AT1G55600 Arabidopsis thaliana HOM05D000081 ORTHO05D011185 8.0e-24 114.8 195 43.6
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 4.0e-23 112.5 193 42.5
Sp1g41220 Schrenkiella parvula HOM05D000081 ORTHO05D011185 5.2e-23 112.1 203 40.9
BraA06t23229Z Brassica rapa HOM05D000081 ORTHO05D024202 1.3e-21 107.5 193 41.5
BcaB05g24088 Brassica carinata HOM05D000081 ORTHO05D011185 1.7e-21 107.1 187 43.3
A06p00110 Brassica napus HOM05D000081 ORTHO05D024202 1.7e-21 107.1 193 41.5
Carub.0001s4412 Capsella rubella HOM05D000081 ORTHO05D011185 2.4e-20 103.2 208 38.5
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 3.2e-20 102.8 200 38.5
BcaB02g10810 Brassica carinata HOM05D000081 ORTHO05D011185 3.0e-18 96.3 200 38.5
CARHR045300 Cardamine hirsuta HOM05D000081 ORTHO05D011185 9.5e-17 91.3 179 40.2
BcaB08g35252 Brassica carinata HOM05D009470 ORTHO05D011185 4.7e-16 89.0 91 60.4
BraA05t20633Z Brassica rapa HOM05D000081 ORTHO05D011185 6.8e-15 85.1 183 38.3
BolC6t36813H Brassica oleracea HOM05D000081 ORTHO05D011185 1.5e-14 84.0 183 37.7
A05p17370 Brassica napus HOM05D000081 ORTHO05D011185 2.6e-14 83.2 183 37.7
BcaC08g44207 Brassica carinata HOM05D000081 ORTHO05D011185 5.8e-14 82.0 183 37.2
C06p16160 Brassica napus HOM05D000081 ORTHO05D011185 5.8e-14 82.0 183 37.2
BcaB05g24089 Brassica carinata HOM05D000081 ORTHO05D011185 4.6e-11 72.4 114 40.4
BcaB05g24086 Brassica carinata HOM05D000081 ORTHO05D011185 3.9e-10 69.3 186 35.5
BcaC01g01440 Brassica carinata HOM05D000081 ORTHO05D014497 2.5e-09 66.6 82 46.3
BolC3t21523H Brassica oleracea HOM05D000081 ORTHO05D014497 2.5e-09 66.6 82 46.3
C03p90710 Brassica napus HOM05D000081 ORTHO05D011185 6.2e-08 62.0 110 42.7
BcaC01g01540 Brassica carinata HOM05D000081 ORTHO05D014497 3.1e-07 59.7 50 56.0
BolC3t21599H Brassica oleracea HOM05D000081 ORTHO05D014497 4.0e-07 59.3 57 54.4
BcaC01g01542 Brassica carinata HOM05D000081 ORTHO05D014497 6.8e-07 58.5 45 60.0
BraA08t32103Z Brassica rapa HOM05D000081 ORTHO05D014497 6.8e-07 58.5 57 56.1
C03p92940 Brassica napus HOM05D000081 ORTHO05D014497 8.9e-07 58.2 57 52.6
A08p00460 Brassica napus HOM05D000081 ORTHO05D014497 1.2e-06 57.8 53 56.6
C03p92930 Brassica napus HOM05D000081 ORTHO05D014497 5.8e-06 55.5 57 52.6


User provided reference genes

Program Settings