Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 9.2e-193 676.8 359 100.0
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.1e-190 669.8 359 99.2
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.1e-190 669.8 359 99.2
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.4e-187 658.3 359 98.1
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.9e-186 655.2 359 97.8
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 4.1e-185 651.4 361 97.2
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 4.4e-179 631.3 363 93.1
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.2e-176 623.2 362 91.4
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 3.5e-176 621.7 366 91.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 1.0e-175 620.2 362 91.2
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.7e-175 619.4 364 90.9
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.3e-174 614.8 366 90.4
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 5.3e-164 581.3 362 84.5
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 6.9e-156 554.3 362 80.4
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 5.7e-142 508.1 361 71.7
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.1e-140 501.9 362 72.7
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 4.1e-140 501.9 361 73.4
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 5.3e-140 501.5 359 73.8
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.5e-139 500.0 362 71.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.5e-139 500.0 362 73.5
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 2.0e-139 499.6 330 77.3
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 2.6e-139 499.2 362 71.8
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 5.9e-139 498.0 362 72.9
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.0e-138 497.3 357 72.5
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.3e-138 496.9 362 72.4
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 1.3e-138 496.9 362 72.4
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 2.2e-138 496.1 355 73.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.8e-138 495.4 362 70.4
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 3.8e-138 495.4 362 72.7
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 4.2e-137 491.9 355 72.4
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 5.5e-137 491.5 345 73.0
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.1e-136 489.6 362 72.1
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 4.7e-136 488.4 343 74.9
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 1.0e-135 487.3 365 69.9
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.8e-135 486.5 353 72.0
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.8e-135 486.5 331 75.2
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 2.3e-135 486.1 333 75.7
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 6.7e-135 484.6 362 69.6
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 6.7e-135 484.6 355 71.5
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 1.1e-134 483.8 343 73.5
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.1e-134 483.8 337 73.0
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 2.6e-134 482.6 336 72.9
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 2.6e-134 482.6 361 70.4
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 3.3e-134 482.3 362 69.1
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 4.4e-134 481.9 362 71.5
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 4.4e-134 481.9 332 75.9
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 1.7e-133 479.9 344 71.2
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 4.8e-133 478.4 362 71.0
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 1.8e-132 476.5 352 71.6
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 3.1e-132 475.7 362 69.6
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 9.1e-132 474.2 342 71.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.2e-131 473.8 351 70.9
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 3.5e-131 472.2 353 70.8
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 4.5e-131 471.9 368 68.8
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 4.5e-131 471.9 371 67.4
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.7e-130 469.9 332 72.9
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 1.7e-130 469.9 371 67.1
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 5.0e-130 468.4 346 69.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 5.0e-130 468.4 362 70.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 5.0e-130 468.4 348 70.7
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.1e-129 467.2 347 70.6
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.4e-129 466.8 347 71.8
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 2.5e-129 466.1 362 68.0
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 2.5e-129 466.1 362 68.8
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 2.5e-129 466.1 332 72.0
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.5e-129 466.1 349 71.3
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 3.2e-129 465.7 348 70.1
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 4.2e-129 465.3 347 71.8
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 5.5e-129 464.9 348 69.8
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.2e-128 463.8 347 71.5
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 2.1e-128 463.0 362 68.5
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 8.0e-128 461.1 361 68.7
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 1.4e-127 460.3 358 68.4
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 6.7e-127 458.0 364 69.5
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 8.8e-127 457.6 348 70.4
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 1.1e-126 457.2 328 73.8
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 2.0e-126 456.4 363 69.1
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 2.0e-126 456.4 348 68.7
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 4.4e-126 455.3 352 68.2
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.3e-125 453.8 360 69.2
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 9.1e-124 447.6 334 67.1
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.9e-121 439.9 362 65.5
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.4e-119 433.7 337 67.1
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 3.0e-119 432.6 361 65.4
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 6.7e-119 431.4 362 67.1
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.5e-118 430.3 358 64.2
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.4e-116 423.7 298 74.8
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 4.5e-115 418.7 269 77.7
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 5.0e-114 415.2 269 77.3
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 2.7e-112 409.5 355 58.3
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 2.0e-110 403.3 328 60.7
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 6.3e-101 371.7 358 57.8
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.6e-99 367.1 296 65.9
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.0e-99 366.7 334 58.1
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.6e-80 303.9 242 66.9
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.4e-79 300.8 290 59.0
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.9e-74 282.7 353 46.5
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 6.8e-71 271.9 269 56.9
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 8.9e-71 271.6 333 46.2
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 6.4e-69 265.4 243 57.6
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 4.6e-67 259.2 228 63.2
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 1.8e-63 247.3 303 47.9
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.8e-62 242.3 330 44.5
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.8e-62 242.3 155 80.0
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 7.6e-62 241.9 360 46.1
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.0e-55 219.5 191 61.3
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 4.5e-54 216.1 198 58.1
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-51 207.2 186 62.9
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.5e-43 179.9 213 47.9
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 3.0e-42 176.8 140 65.0
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.3e-40 171.4 159 55.3
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 2.8e-40 170.2 261 42.1
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.9e-39 165.6 91 92.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.7e-34 149.1 114 65.8
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 9.0e-31 138.7 131 55.7
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.8e-23 114.4 66 84.8
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 6.5e-21 105.9 57 91.2
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 2.2e-16 90.9 105 52.4
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.2e-16 90.9 86 53.5
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 8.5e-13 79.0 43 90.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 3.2e-12 77.0 46 82.6
C06p06150 Brassica napus HOM05D047594 ORTHO05D040577 1.2e-06 58.5 35 82.9
BolC6t35726H Brassica oleracea HOM05D047594 ORTHO05D040577 1.2e-06 58.5 35 82.9


User provided reference genes

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