Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 1.1e-309 1065.8 538 100.0
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 2.1e-305 1051.6 538 98.9
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 3.2e-298 1027.7 538 97.0
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 1.1e-293 1012.7 539 94.8
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 2.2e-291 1005.0 583 89.5
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 2.4e-277 958.4 540 90.2
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 2.0e-271 938.7 539 87.8
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.9e-266 922.2 541 87.8
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 3.2e-266 921.4 541 87.6
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 6.1e-265 917.1 541 87.4
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.1e-263 912.9 541 86.9
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 4.4e-263 911.0 539 86.5
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 1.2e-260 902.9 550 85.8
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.0e-259 899.8 540 86.3
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.2e-257 892.9 540 85.6
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 3.6e-257 891.3 540 85.4
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 3.2e-250 868.2 541 84.1
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 1.3e-243 846.3 565 78.6
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 8.6e-227 790.4 546 75.1
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.2e-180 637.1 548 61.1
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 2.7e-180 636.0 547 59.4
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 5.6e-178 628.2 552 60.7
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.6e-177 626.7 552 60.5
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 2.6e-175 619.4 550 60.0
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 3.4e-175 619.0 553 61.7
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.5e-175 618.6 552 59.8
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 3.8e-174 615.5 546 61.5
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 6.5e-174 614.8 566 58.1
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.4e-173 613.6 553 60.4
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 4.2e-173 612.1 541 59.0
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 9.3e-173 610.9 549 58.7
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 9.3e-173 610.9 554 58.3
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 6.0e-172 608.2 555 60.2
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 1.4e-168 597.0 556 57.7
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 3.1e-168 595.9 554 58.5
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 4.0e-168 595.5 539 57.7
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 6.9e-168 594.7 524 60.3
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.6e-167 592.8 523 59.5
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 4.5e-167 592.0 538 58.7
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.7e-166 590.1 524 59.4
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 2.9e-166 589.3 548 56.8
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.0e-166 588.6 524 59.4
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 8.4e-166 587.8 521 59.1
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.4e-165 587.0 542 56.8
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.9e-165 586.6 538 56.9
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 1.9e-165 586.6 524 59.4
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 7.1e-165 584.7 521 58.9
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 7.1e-165 584.7 556 57.9
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.2e-164 583.9 524 59.2
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 1.2e-164 583.9 534 59.0
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 3.5e-164 582.4 556 55.4
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 4.6e-164 582.0 557 55.7
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.3e-163 580.5 547 56.5
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.0e-163 579.3 548 57.3
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.1e-162 577.4 556 57.0
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.9e-162 576.6 555 55.9
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 3.3e-162 575.9 562 56.6
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 6.3e-161 571.6 544 55.1
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.1e-160 570.9 546 57.3
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 3.1e-160 569.3 545 55.8
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 5.9e-159 565.1 549 54.8
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 7.7e-159 564.7 550 54.7
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 7.7e-159 564.7 549 55.9
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 3.8e-158 562.4 553 55.5
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 3.8e-158 562.4 542 57.0
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 1.9e-157 560.1 550 54.4
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 1.2e-156 557.4 551 55.2
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 1.6e-156 557.0 552 54.5
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 4.6e-156 555.4 513 56.1
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 3.0e-155 552.7 544 54.6
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 5.1e-155 552.0 548 55.1
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 8.8e-155 551.2 504 58.1
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 1.5e-154 550.4 325 87.7
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 2.0e-154 550.1 550 54.5
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 3.3e-154 549.3 545 53.6
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 5.7e-154 548.5 548 53.6
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 7.4e-154 548.1 549 53.9
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 2.2e-153 546.6 502 58.2
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 8.2e-153 544.7 499 58.5
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 3.1e-152 542.7 552 54.2
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 5.3e-152 542.0 543 54.5
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 5.3e-152 542.0 549 53.9
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 7.7e-151 538.1 556 53.8
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 2.2e-150 536.6 553 54.8
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 5.0e-150 535.4 564 53.0
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 1.6e-148 530.4 552 52.9
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 1.8e-147 526.9 542 53.5
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 3.0e-147 526.2 557 51.9
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.1e-146 524.2 579 51.3
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 1.5e-146 523.9 700 46.0
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 8.2e-145 518.1 568 50.2
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.1e-144 515.8 548 52.9
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 4.2e-141 505.8 511 53.0
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 5.2e-139 498.8 545 50.1
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 4.8e-137 492.3 464 55.6
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 1.5e-133 480.7 548 50.4
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 1.6e-132 477.2 551 51.9
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 1.4e-131 474.2 540 50.2
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 2.8e-129 466.5 445 56.6
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.8e-129 466.5 516 50.8
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 3.7e-129 466.1 418 59.8
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 9.1e-128 461.5 540 50.0
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 3.2e-125 453.0 548 48.4
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.8e-123 447.2 561 47.1
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.6e-119 434.1 493 49.5
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 9.2e-112 408.3 699 41.2
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 2.9e-105 386.7 371 54.7
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 2.4e-104 383.6 341 62.2
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 7.5e-98 362.1 532 40.4
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.2e-92 344.7 534 39.3
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.6e-92 344.4 541 39.2
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 1.2e-90 338.2 320 58.4
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 5.4e-88 329.3 346 56.1
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 2.1e-87 327.4 396 48.2
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 2.7e-87 327.0 364 53.0
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.3e-86 323.9 312 59.9
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 5.1e-86 322.8 533 37.1
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 9.9e-82 308.5 511 37.8
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 3.2e-80 303.5 359 50.1
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 4.0e-75 286.6 336 49.4
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 1.7e-73 281.2 384 43.8
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 2.1e-71 274.2 145 92.4
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 9.9e-66 255.4 165 79.4
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 3.5e-63 246.9 340 46.5
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.6e-55 221.5 201 51.2
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 1.9e-48 198.0 136 71.3
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 5.5e-48 196.4 179 50.3
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 2.1e-47 194.5 134 70.9
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 7.9e-47 192.6 139 66.9
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 2.8e-44 184.1 152 63.2
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 6.3e-44 183.0 506 30.4
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 1.7e-41 174.9 214 44.9
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 3.9e-38 163.7 106 72.6
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.6e-29 134.4 83 78.3
Cpa.g.sc0.162 Carica papaya HOM05D004567 ORTHO05D005726 4.2e-24 117.1 113 54.9
ClCG10G008350 Citrullus lanatus HOM05D004567 ORTHO05D005726 4.2e-24 117.1 126 46.8
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.3e-22 111.3 99 52.5
unitig_578.g16281 Utricularia gibba HOM05D004567 ORTHO05D005726 5.7e-21 106.7 139 42.4
Sed0015165 Sechium edule HOM05D004567 ORTHO05D005726 1.8e-19 101.7 129 43.4
BcaB07g33467 Brassica carinata HOM05D004567 ORTHO05D005726 5.0e-17 93.6 68 70.6
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.2e-16 90.5 62 69.4
FAN11G1323 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.6e-15 88.6 105 45.7
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.0e-13 81.6 83 56.6
Actinidia24396 Actinidia chinensis HOM05D004567 ORTHO05D005726 3.4e-13 80.9 102 43.1
SHI31088 Sapria himalayana HOM05D004567 ORTHO05D005726 5.9e-10 70.1 104 39.4
SEGI_26710 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.0e-09 69.3 90 42.2
Rhsim04G0129400 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.3e-09 68.9 96 37.5
QL01p003984 Quercus lobata HOM05D004567 ORTHO05D000318 1.5e-08 65.5 69 42.0
SEGI_29421 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.9e-08 65.1 89 39.3
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 2.5e-08 64.7 51 56.9
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 1.0e-06 59.3 150 35.3
Cre06.g258400 Chlamydomonas reinhardtii HOM05D004567 ORTHO05D005726 3.0e-06 57.8 120 30.0


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