Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p87720 Brassica napus HOM05D000975 ORTHO05D000395 6.0e-32 140.2 69 100.0
A01p33200 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A02p27510 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A03p63730 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A03p64300 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A03p68230 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A05p31260 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A06p23370 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A06p27620 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A07p22620 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A09p29820 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
A10p04890 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
C02p32270 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
C07p26090 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
C08p14250 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
C09p28680 Brassica napus HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BolC5t32446H Brassica oleracea HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BolC6t38532H Brassica oleracea HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA01t03457Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA02t07780Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA02t08986Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA03t15343Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA03t15445Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA06t23870Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA08t32983Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA08t33464Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA09t38545Z Brassica rapa HOM05D000975 ORTHO05D000395 3.9e-31 137.5 68 98.5
BraA09t38304Z Brassica rapa HOM05D000975 ORTHO05D000395 5.1e-31 137.1 68 97.1
C09p13200 Brassica napus HOM05D000975 ORTHO05D000395 8.6e-31 136.3 68 97.1
C09p26450 Brassica napus HOM05D000975 ORTHO05D000395 8.6e-31 136.3 68 97.1
C07p11500 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-30 136.0 68 97.1
A09p24170 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-30 135.6 68 97.1
C02p45170 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-30 135.6 68 97.1
C02p51070 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-30 135.6 68 97.1
C07p07350 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-30 135.6 68 97.1
BolC7t41153H Brassica oleracea HOM05D000975 ORTHO05D000395 1.5e-30 135.6 68 97.1
A01p14500 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
A03p57800 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
A09p29870 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
C02p44860 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
C05p33150 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
C06p29670 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
C09p43980 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
BolC4t25467H Brassica oleracea HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
BolC5t33485H Brassica oleracea HOM05D000975 ORTHO05D000395 1.9e-30 135.2 68 97.1
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 2.5e-30 134.8 68 97.1
C04p20980 Brassica napus HOM05D000975 ORTHO05D000395 2.5e-30 134.8 68 97.1
C07p32030 Brassica napus HOM05D000975 ORTHO05D000395 4.3e-30 134.0 68 97.1
BolC3t21041H Brassica oleracea HOM05D000975 ORTHO05D000395 4.3e-30 134.0 68 97.1
BraA09t37384Z Brassica rapa HOM05D000975 ORTHO05D000395 5.6e-30 133.7 68 97.1
C04p57180 Brassica napus HOM05D000975 ORTHO05D000395 9.5e-30 132.9 68 95.6
A06p32990 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-29 132.1 68 95.6
BraA06t26230Z Brassica rapa HOM05D000975 ORTHO05D000395 1.6e-29 132.1 68 95.6
C01p40930 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-28 129.4 68 94.1
C02p09980 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-28 129.4 68 94.1
A06p20320 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-28 128.3 68 95.6
A09p40890 Brassica napus HOM05D000975 ORTHO05D000395 3.8e-26 120.9 68 91.2
BraA07t28293Z Brassica rapa HOM05D000975 ORTHO05D000395 4.9e-26 120.6 59 98.3
A01p15400 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-24 115.9 58 96.6
BraA04t16291Z Brassica rapa HOM05D000975 ORTHO05D000395 3.0e-23 111.3 55 98.2
BcaB04g17403 Brassica carinata HOM05D000975 ORTHO05D000395 1.7e-18 95.5 56 80.4
C03p72680 Brassica napus HOM05D000975 ORTHO05D000395 2.9e-18 94.7 68 69.1
BolC3t19566H Brassica oleracea HOM05D000975 ORTHO05D000395 8.4e-18 93.2 67 68.7
A05p31280 Brassica napus HOM05D000975 ORTHO05D000395 4.6e-16 87.4 68 60.3
A02p27520 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-15 86.3 68 58.8
A09p24140 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-15 86.3 68 60.3
A09p29840 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-15 86.3 68 60.3
BraA02t07783Z Brassica rapa HOM05D000975 ORTHO05D000395 1.0e-15 86.3 68 58.8
A01p28030 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 58.8
A03p57780 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 60.3
A03p63720 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 60.3
A10p04860 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 60.3
BraA02t07024Z Brassica rapa HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 60.3
BraA08t32985Z Brassica rapa HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 60.3
BraSC36t46028Z Brassica rapa HOM05D000975 ORTHO05D000395 1.3e-15 85.9 68 58.8
C06p29660 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-15 85.1 68 57.4
BolC5t32443H Brassica oleracea HOM05D000975 ORTHO05D000395 3.9e-15 84.3 68 57.4
A08p14770 Brassica napus HOM05D000975 ORTHO05D000395 5.1e-15 84.0 68 58.8
A01p29560 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 58.8
A01p33220 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 58.8
C02p51090 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
C03p75420 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
C03p87700 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
C04p20990 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
C07p32050 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
C09p13210 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
C09p28660 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
BolC3t21038H Brassica oleracea HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
BolC5t33488H Brassica oleracea HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
BraA02t07585Z Brassica rapa HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
BraA06t26232Z Brassica rapa HOM05D000975 ORTHO05D000395 6.6e-15 83.6 66 60.6
BraA09t38305Z Brassica rapa HOM05D000975 ORTHO05D000395 6.6e-15 83.6 68 57.4
A03p68250 Brassica napus HOM05D000975 ORTHO05D000395 8.7e-15 83.2 68 57.4
A06p21930 Brassica napus HOM05D000975 ORTHO05D000395 8.7e-15 83.2 68 58.8
C02p32300 Brassica napus HOM05D000975 ORTHO05D000395 8.7e-15 83.2 68 57.4
A06p23390 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-14 82.8 68 57.4
C01p09510 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-14 82.8 68 55.9
C02p44850 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-14 82.8 68 55.9
C09p43960 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-14 82.8 68 57.4
BraA09t39579Z Brassica rapa HOM05D000975 ORTHO05D000395 1.1e-14 82.8 68 57.4
C02p09990 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-14 82.4 68 55.9
C07p07380 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-14 82.4 68 55.9
C08p14280 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-14 82.4 68 57.4
BolC7t41155H Brassica oleracea HOM05D000975 ORTHO05D000395 1.5e-14 82.4 68 55.9
BolC4t27382H Brassica oleracea HOM05D000975 ORTHO05D000395 1.9e-14 82.0 68 55.9
C05p35130 Brassica napus HOM05D000975 ORTHO05D000395 3.3e-14 81.3 68 63.2
BolC7t41598H Brassica oleracea HOM05D000975 ORTHO05D000395 3.3e-14 81.3 68 63.2
BolC8t50333H Brassica oleracea HOM05D000975 ORTHO05D000395 3.3e-14 81.3 68 63.2
C09p26430 Brassica napus HOM05D000975 ORTHO05D000395 5.6e-14 80.5 68 55.9
BolC2t08855H Brassica oleracea HOM05D000975 ORTHO05D000395 9.6e-14 79.7 68 61.8
BolC7t42810H Brassica oleracea HOM05D000975 ORTHO05D000395 1.3e-13 79.3 68 60.3
C07p21350 Brassica napus HOM05D000975 ORTHO05D000395 2.1e-13 78.6 68 61.8
BolC4t25158H Brassica oleracea HOM05D000975 ORTHO05D000395 2.1e-13 78.6 68 60.3
BolC4t25133H Brassica oleracea HOM05D000975 ORTHO05D000395 2.8e-13 78.2 68 60.3
BolC4t25671H Brassica oleracea HOM05D000975 ORTHO05D000395 3.6e-13 77.8 68 61.8
C01p34250 Brassica napus HOM05D000975 ORTHO05D000395 6.2e-13 77.0 60 61.7
BolC1t03394H Brassica oleracea HOM05D000975 ORTHO05D000395 6.2e-13 77.0 60 61.7
C04p28020 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-12 75.1 63 63.5
C02p28110 Brassica napus HOM05D000975 ORTHO05D003128 2.0e-11 72.0 60 63.3
C04p36230 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-11 71.6 61 62.3
BolC2t09401H Brassica oleracea HOM05D000975 ORTHO05D000395 3.4e-11 71.2 64 59.4
BolC2t08412H Brassica oleracea HOM05D000975 ORTHO05D000395 5.8e-11 70.5 69 56.5
Carub.0006s2603 Capsella rubella HOM05D000975 ORTHO05D000395 5.8e-11 70.5 68 48.5
C04p51470 Brassica napus HOM05D000975 ORTHO05D000395 7.6e-11 70.1 63 60.3
BolC9t56171H Brassica oleracea HOM05D000975 ORTHO05D000395 9.9e-11 69.7 68 57.4
Carub.0002s0847 Capsella rubella HOM05D000975 ORTHO05D000395 2.2e-10 68.6 68 47.1
Carub.0027s0001 Capsella rubella HOM05D000975 ORTHO05D000395 2.9e-10 68.2 68 47.1
C09p23720 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-09 65.9 61 55.7
C09p39110 Brassica napus HOM05D000975 ORTHO05D000395 1.9e-09 65.5 54 59.3
BolC9t56791H Brassica oleracea HOM05D000975 ORTHO05D000395 1.9e-09 65.5 54 59.3
C03p75400 Brassica napus HOM05D000975 ORTHO05D000395 3.2e-09 64.7 31 96.8
BraA01t03082Z Brassica rapa HOM05D000975 ORTHO05D000395 3.2e-09 64.7 31 96.8
BraA02t08171Z Brassica rapa HOM05D000975 ORTHO05D000395 3.2e-09 64.7 31 96.8
BraA09t40596Z Brassica rapa HOM05D000975 ORTHO05D000395 3.2e-09 64.7 31 96.8
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 7.1e-09 63.5 62 41.9
C07p11530 Brassica napus HOM05D000975 ORTHO05D000395 9.3e-09 63.2 56 51.8
BraA05t21655Z Brassica rapa HOM05D000975 ORTHO05D000395 1.2e-08 62.8 31 93.5
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-08 61.6 62 40.3
Aa31sc129G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-08 61.6 62 40.3
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-08 61.6 62 40.3
AL8G16340 Arabidopsis lyrata HOM05D000975 ORTHO05D019714 2.3e-07 58.5 68 44.1
Aa31sc296G50 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.0e-07 58.2 46 50.0
C07p25800 Brassica napus HOM05D000975 ORTHO05D003128 3.0e-07 58.2 56 55.4
Aa31sc507G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.9e-07 57.8 62 37.1
Aa31LG7G11520 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.1e-07 57.4 65 36.9
AT5G35050 Arabidopsis thaliana HOM05D000975 ORTHO05D000395 5.1e-07 57.4 60 50.0
BolC3t20043H Brassica oleracea HOM05D000975 ORTHO05D003128 1.9e-06 55.5 43 65.1
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.5e-06 55.1 62 37.1
C02p34180 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-06 55.1 42 66.7
BolC1t02632H Brassica oleracea HOM05D000975 ORTHO05D000395 2.5e-06 55.1 42 66.7
Aa31sc33G60 Aethionema arabicum HOM05D003348 ORTHO05D000395 4.3e-06 54.3 60 41.7
Aa31sc172G60 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.6e-06 53.9 60 40.0
BcaC03g15228 Brassica carinata HOM05D000975 ORTHO05D003128 7.4e-06 53.5 42 64.3
AL3G46170 Arabidopsis lyrata HOM05D021271 ORTHO05D019714 9.6e-06 53.1 59 42.4
AL4G17040 Arabidopsis lyrata HOM05D021271 ORTHO05D019714 9.6e-06 53.1 59 42.4
AL7G41490 Arabidopsis lyrata HOM05D021271 ORTHO05D019714 9.6e-06 53.1 59 42.4


User provided reference genes

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