Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 2.5e-75 285.4 150 100.0
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 2.5e-75 285.4 150 100.0
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 2.5e-67 258.8 151 92.1
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 9.5e-67 256.9 151 91.4
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.7e-63 246.1 148 87.8
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 9.9e-56 220.3 160 75.6
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 2.2e-55 219.2 154 79.9
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 3.5e-53 211.8 158 74.7
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.5e-51 206.5 158 73.4
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.5e-51 205.7 160 73.1
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 3.3e-51 205.3 152 77.6
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 2.1e-50 202.6 156 71.2
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 6.2e-50 201.1 152 75.7
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 9.0e-49 197.2 152 75.0
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.4e-48 195.3 152 74.3
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 4.4e-48 194.9 151 74.8
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 7.1e-46 187.6 154 70.1
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 2.0e-40 169.5 154 62.3
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 5.1e-36 154.8 152 58.6
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.1e-35 153.7 133 59.4
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 2.5e-35 152.5 98 73.5
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 2.5e-35 152.5 101 71.3
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 3.3e-35 152.1 137 59.1
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 5.6e-35 151.4 128 65.6
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 7.4e-35 151.0 153 53.6
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 7.4e-35 151.0 158 53.8
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 9.6e-35 150.6 101 70.3
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.6e-34 149.8 150 55.3
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 3.7e-34 148.7 150 56.7
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 6.2e-34 147.9 150 57.3
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 6.2e-34 147.9 150 54.0
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 6.2e-34 147.9 150 56.0
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 1.1e-33 147.1 113 63.7
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.1e-33 147.1 107 66.4
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.4e-33 146.7 134 56.7
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.4e-33 146.7 111 64.9
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 3.1e-33 145.6 101 70.3
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 4.0e-33 145.2 150 56.0
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.0e-33 145.2 111 64.0
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 5.3e-33 144.8 98 69.4
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 5.3e-33 144.8 151 54.3
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 5.3e-33 144.8 150 53.3
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 5.3e-33 144.8 98 71.4
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 6.9e-33 144.4 99 70.7
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 9.0e-33 144.1 98 67.3
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 9.0e-33 144.1 150 56.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.2e-32 143.7 133 60.2
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.5e-32 143.3 150 50.0
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.5e-32 143.3 98 70.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 2.0e-32 142.9 145 54.5
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 2.6e-32 142.5 109 66.1
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 3.4e-32 142.1 122 59.0
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 3.4e-32 142.1 109 66.1
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 3.4e-32 142.1 150 56.0
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 3.4e-32 142.1 98 71.4
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.5e-32 141.7 98 66.3
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 5.8e-32 141.4 99 66.7
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 9.9e-32 140.6 135 53.3
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.3e-31 140.2 98 66.3
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.9e-31 139.0 98 66.3
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 2.9e-31 139.0 98 67.3
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.9e-31 138.3 98 64.3
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.9e-31 138.3 98 64.3
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 4.9e-31 138.3 125 59.2
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 6.4e-31 137.9 147 55.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 6.4e-31 137.9 145 53.8
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.1e-30 137.1 96 63.5
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.4e-30 136.7 121 59.5
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 2.4e-30 136.0 147 49.0
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 3.2e-30 135.6 142 54.2
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 3.2e-30 135.6 149 51.0
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 4.2e-30 135.2 120 57.5
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 4.2e-30 135.2 121 57.9
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 5.5e-30 134.8 116 59.5
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 7.1e-30 134.4 98 67.3
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.2e-29 133.7 105 61.0
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 1.6e-29 133.3 107 60.7
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.6e-29 133.3 95 68.4
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.6e-29 133.3 157 47.8
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.7e-29 132.5 98 67.3
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 3.5e-29 132.1 150 51.3
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 3.5e-29 132.1 105 61.9
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.5e-29 132.1 152 53.3
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 4.6e-29 131.7 150 46.7
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 4.6e-29 131.7 105 61.9
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.0e-28 130.6 107 60.7
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 1.8e-28 129.8 118 55.1
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 2.3e-28 129.4 113 57.5
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 3.0e-28 129.0 105 61.0
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 3.9e-28 128.6 93 66.7
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 5.1e-28 128.3 97 64.9
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 6.7e-28 127.9 112 58.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 2.5e-27 125.9 107 57.9
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 3.3e-27 125.6 96 63.5
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 7.4e-27 124.4 129 53.5
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 9.6e-27 124.0 97 62.9
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 3.7e-26 122.1 151 48.3
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 4.8e-26 121.7 137 48.9
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 3.1e-25 119.0 124 52.4
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 3.1e-25 119.0 98 58.2
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 4.0e-25 118.6 108 51.9
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 5.8e-24 114.8 168 39.9
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 6.5e-23 111.3 120 50.8
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.5e-22 109.4 97 58.8
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 1.2e-21 107.1 74 68.9
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 3.9e-20 102.1 98 55.1
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 4.3e-19 98.6 186 35.5
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 5.7e-19 98.2 150 44.7
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 6.3e-18 94.7 107 53.3
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 4.1e-17 92.0 149 38.3
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.0e-16 89.7 61 63.9
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 7.6e-16 87.8 107 41.1
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 2.2e-15 86.3 55 74.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 3.8e-15 85.5 53 75.5
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 5.0e-15 85.1 96 45.8
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 5.5e-14 81.6 97 41.2
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 5.5e-14 81.6 113 38.9
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.3e-10 70.5 101 47.5
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 2.6e-08 62.8 103 36.9
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 3.8e-07 58.9 42 57.1
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 5.0e-07 58.5 96 33.3


User provided reference genes

Program Settings