Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p84600 Brassica napus HOM05D018375 ORTHO05D021816 3.4e-121 438.3 219 100.0
BolC3t20749H Brassica oleracea HOM05D018375 ORTHO05D021816 3.4e-121 438.3 219 100.0
BcaC09g51247 Brassica carinata HOM05D018375 ORTHO05D021816 3.8e-48 195.7 151 71.5
BcaC05g30229 Brassica carinata HOM05D000848 ORTHO05D003342 1.6e-38 163.7 224 47.3
C03p59400 Brassica napus HOM05D018375 ORTHO05D021816 1.4e-26 124.0 108 67.6
BcaB06g25358 Brassica carinata HOM05D000848 ORTHO05D003342 7.2e-23 111.7 99 56.6
A06p33060 Brassica napus HOM05D018375 ORTHO05D021816 3.5e-17 92.8 88 60.2
C06p21550 Brassica napus HOM05D000848 ORTHO05D022013 1.0e-16 91.3 231 35.1
BraA06t26236Z Brassica rapa HOM05D018375 ORTHO05D021816 2.2e-16 90.1 88 59.1
BNapus_Darmor_BZH_scaffold_64p00140 Brassica napus HOM05D000848 ORTHO05D003342 6.5e-16 88.6 237 31.6
A07p34870 Brassica napus HOM05D000848 ORTHO05D003342 8.5e-16 88.2 240 31.2
C07p58790 Brassica napus HOM05D000848 ORTHO05D003342 1.5e-15 87.4 240 27.9
BolC3t18271H Brassica oleracea HOM05D000848 ORTHO05D022013 1.5e-15 87.4 231 34.2
C08p45890 Brassica napus HOM05D000848 ORTHO05D003342 3.2e-15 86.3 241 27.8
BolC8t52141H Brassica oleracea HOM05D000848 ORTHO05D003342 3.2e-15 86.3 241 27.8
C03p00580 Brassica napus HOM05D000848 ORTHO05D040065 4.2e-15 85.9 185 37.3
C04p01170 Brassica napus HOM05D000848 ORTHO05D003342 2.1e-14 83.6 210 33.3
C03p45200 Brassica napus HOM05D000848 ORTHO05D003342 6.1e-14 82.0 246 29.7
A03p12850 Brassica napus HOM05D000848 ORTHO05D011438 1.0e-13 81.3 232 32.8
BraA03t10593Z Brassica rapa HOM05D000848 ORTHO05D011438 1.0e-13 81.3 232 32.8
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.4e-13 80.9 207 30.9
C08p40030 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-13 80.9 246 26.8
BraA08t34208Z Brassica rapa HOM05D000848 ORTHO05D003342 2.3e-13 80.1 232 30.6
C09p41410 Brassica napus HOM05D000848 ORTHO05D011438 3.0e-13 79.7 232 31.9
BolC8t51574H Brassica oleracea HOM05D000848 ORTHO05D003342 3.0e-13 79.7 241 26.1
A03p57190 Brassica napus HOM05D000848 ORTHO05D003342 6.8e-13 78.6 173 34.7
C02p54660 Brassica napus HOM05D000848 ORTHO05D011438 6.8e-13 78.6 231 34.2
BolC9t57016H Brassica oleracea HOM05D000848 ORTHO05D011438 6.8e-13 78.6 231 31.2
BolC4t22620H Brassica oleracea HOM05D000848 ORTHO05D011438 2.0e-12 77.0 222 32.4
C03p85290 Brassica napus HOM05D000848 ORTHO05D003342 2.6e-12 76.6 241 25.7
A02p09070 Brassica napus HOM05D000848 ORTHO05D003342 3.4e-12 76.3 245 29.8
BcaC02g11361 Brassica carinata HOM05D000848 ORTHO05D011438 4.4e-12 75.9 124 37.9
C04p56700 Brassica napus HOM05D000848 ORTHO05D003342 4.4e-12 75.9 236 30.9
C07p42200 Brassica napus HOM05D000848 ORTHO05D003342 4.4e-12 75.9 245 29.4
BolC4t27202H Brassica oleracea HOM05D000848 ORTHO05D003342 4.4e-12 75.9 236 30.9
BraA06t24860Z Brassica rapa HOM05D000848 ORTHO05D032124 4.4e-12 75.9 61 57.4
C09p53680 Brassica napus HOM05D013019 ORTHO05D003342 5.7e-12 75.5 244 29.9
BolC9t58243H Brassica oleracea HOM05D013019 ORTHO05D003342 5.7e-12 75.5 244 29.9
BraA05t20699Z Brassica rapa HOM05D013019 ORTHO05D003342 5.7e-12 75.5 253 29.6
C01p47370 Brassica napus HOM05D000848 ORTHO05D003342 9.8e-12 74.7 239 26.8
BolC5t29138H Brassica oleracea HOM05D000848 ORTHO05D003342 9.8e-12 74.7 239 26.8
C05p03590 Brassica napus HOM05D000848 ORTHO05D023963 1.7e-11 73.9 239 26.8
BolC2t11819H Brassica oleracea HOM05D000848 ORTHO05D015498 2.2e-11 73.6 234 29.1
BolC3t15415H Brassica oleracea HOM05D000848 ORTHO05D003342 2.2e-11 73.6 239 26.8
C02p59740 Brassica napus HOM05D000848 ORTHO05D003342 2.8e-11 73.2 239 27.6
A07p10430 Brassica napus HOM05D000848 ORTHO05D011438 1.1e-10 71.2 226 32.3
C03p07760 Brassica napus HOM05D000848 ORTHO05D011438 1.1e-10 71.2 226 31.9
BraA03t10164Z Brassica rapa HOM05D000848 ORTHO05D011438 1.1e-10 71.2 226 32.3
BraA08t33188Z Brassica rapa HOM05D000848 ORTHO05D011438 1.1e-10 71.2 226 32.3
C01p38710 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-10 70.9 61 50.8
C03p29700 Brassica napus HOM05D000848 ORTHO05D011438 1.4e-10 70.9 226 32.7
BolC3t18957H Brassica oleracea HOM05D000848 ORTHO05D000007 3.1e-10 69.7 67 53.7
BcaB02g08198 Brassica carinata HOM05D000848 ORTHO05D003342 5.4e-10 68.9 139 34.5
C01p28500 Brassica napus HOM05D000848 ORTHO05D003342 5.4e-10 68.9 245 28.2
BolC3t20476H Brassica oleracea HOM05D000848 ORTHO05D003342 7.0e-10 68.6 69 50.7
BcaC07g39283 Brassica carinata HOM05D000848 ORTHO05D003342 1.2e-09 67.8 169 34.9
BolC7t46327H Brassica oleracea HOM05D000848 ORTHO05D003342 1.2e-09 67.8 36 75.0
BraA02t08013Z Brassica rapa HOM05D000848 ORTHO05D003342 2.0e-09 67.0 61 50.8
A01p08190 Brassica napus HOM05D000848 ORTHO05D003342 2.7e-09 66.6 63 54.0
C01p33860 Brassica napus HOM05D000848 ORTHO05D003342 3.5e-09 66.2 257 27.2
C02p55550 Brassica napus HOM05D000848 ORTHO05D011438 3.5e-09 66.2 212 33.0
BolC9t59892H Brassica oleracea HOM05D000848 ORTHO05D033378 4.5e-09 65.9 35 74.3
A07p37240 Brassica napus HOM05D000848 ORTHO05D003342 7.8e-09 65.1 147 32.0
C01p37290 Brassica napus HOM05D000848 ORTHO05D003342 7.8e-09 65.1 147 32.0
C05p58720 Brassica napus HOM05D000848 ORTHO05D021910 7.8e-09 65.1 143 30.1
C07p07060 Brassica napus HOM05D000848 ORTHO05D003342 7.8e-09 65.1 147 32.0
BraA07t31284Z Brassica rapa HOM05D000848 ORTHO05D003342 7.8e-09 65.1 147 32.0
A09p39190 Brassica napus HOM05D000848 ORTHO05D003342 1.7e-08 63.9 246 26.8
BraA10t43227Z Brassica rapa HOM05D000848 ORTHO05D003342 1.7e-08 63.9 231 25.5
BolC9t57644H Brassica oleracea HOM05D000848 ORTHO05D003342 3.8e-08 62.8 147 31.3
BraA05t19719Z Brassica rapa HOM05D000848 ORTHO05D003342 3.8e-08 62.8 111 36.9
A07p20800 Brassica napus HOM05D001943 ORTHO05D001969 1.1e-07 61.2 233 27.0
BcaC05g25055 Brassica carinata HOM05D000848 ORTHO05D003342 1.5e-07 60.8 124 32.3
BolC3t12896H Brassica oleracea HOM05D000848 ORTHO05D003342 1.9e-07 60.5 147 30.6
A09p10540 Brassica napus HOM05D000848 ORTHO05D003342 4.3e-07 59.3 43 53.5
BcaC09g49472 Brassica carinata HOM05D000848 ORTHO05D003342 9.5e-07 58.2 129 34.1
BolC2t11262H Brassica oleracea HOM05D000848 ORTHO05D003342 1.2e-06 57.8 77 39.0
Carub.0002s1565 Capsella rubella HOM05D000848 ORTHO05D003342 1.6e-06 57.4 43 53.5
BcaB07g30523 Brassica carinata HOM05D000848 ORTHO05D040065 2.1e-06 57.0 71 50.7
BcaC01g06423 Brassica carinata HOM05D000848 ORTHO05D020139 2.1e-06 57.0 56 42.9
Carub.0007s3131 Capsella rubella HOM05D000848 ORTHO05D003342 2.1e-06 57.0 97 33.0
BcaC07g37825 Brassica carinata HOM05D000848 ORTHO05D014957 2.8e-06 56.6 76 40.8
Carub.0002s0549 Capsella rubella HOM05D000848 ORTHO05D003342 3.6e-06 56.2 97 33.0
A02p32130 Brassica napus HOM05D000848 ORTHO05D020100 4.7e-06 55.8 110 26.4
Carub.0001s1624 Capsella rubella HOM05D000848 ORTHO05D003342 4.7e-06 55.8 43 53.5
BolC8t47913H Brassica oleracea HOM05D000848 ORTHO05D003342 6.1e-06 55.5 41 61.0


User provided reference genes

Program Settings