Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p83850 Brassica napus HOM05D005634 ORTHO05D006926 1.6e-114 416.0 201 100.0
C09p11080 Brassica napus HOM05D005634 ORTHO05D006926 1.6e-114 416.0 201 100.0
BolC3t20661H Brassica oleracea HOM05D005634 ORTHO05D006926 1.2e-112 409.8 201 99.0
BolC2t11955H Brassica oleracea HOM05D005634 ORTHO05D006926 3.5e-109 398.3 201 95.5
C02p59000 Brassica napus HOM05D005634 ORTHO05D006926 6.0e-109 397.5 201 95.5
BcaC03g17858 Brassica carinata HOM05D005634 ORTHO05D006926 1.1e-81 307.0 160 93.8
A07p23910 Brassica napus HOM05D005634 ORTHO05D006926 7.5e-51 204.5 115 91.3
BraA10t44343Z Brassica rapa HOM05D005634 ORTHO05D006926 4.9e-50 201.8 115 90.4
BcaC09g50547 Brassica carinata HOM05D005634 ORTHO05D006926 4.6e-16 89.0 47 91.5
A02p29530 Brassica napus HOM05D005634 ORTHO05D096861 4.6e-16 89.0 51 76.5
C01p24050 Brassica napus HOM05D005634 ORTHO05D006926 4.6e-16 89.0 47 91.5
BolC1t02361H Brassica oleracea HOM05D005634 ORTHO05D006926 4.6e-16 89.0 47 91.5
BraA01t01856Z Brassica rapa HOM05D005634 ORTHO05D006926 4.6e-16 89.0 47 91.5
A05p20300 Brassica napus HOM05D005634 ORTHO05D100822 7.8e-16 88.2 51 76.5
BcaC01g00747 Brassica carinata HOM05D005634 ORTHO05D006926 1.3e-15 87.4 48 89.6
A01p19140 Brassica napus HOM05D005634 ORTHO05D006926 1.3e-15 87.4 47 89.4
BcaNung01637 Brassica carinata HOM05D005634 ORTHO05D006926 2.3e-15 86.7 47 89.4
Thhalv10026171m.g Eutrema salsugineum HOM05D005634 ORTHO05D006926 2.3e-15 86.7 47 89.4
Aa31LG11G15270 Aethionema arabicum HOM05D005634 ORTHO05D006926 1.5e-14 84.0 48 81.2
Carub.0007s1312 Capsella rubella HOM05D005634 ORTHO05D006926 1.9e-14 83.6 46 87.0
AL7G24960 Arabidopsis lyrata HOM05D005634 ORTHO05D006926 4.3e-14 82.4 46 87.0
AT4G27700 Arabidopsis thaliana HOM05D005634 ORTHO05D006926 4.3e-14 82.4 46 87.0
MD01G1225500 Malus domestica HOM05D005634 ORTHO05D006926 4.3e-14 82.4 69 58.0
CARHR235430 Cardamine hirsuta HOM05D005634 ORTHO05D006926 1.6e-13 80.5 46 84.8
THA.LOC104799954 Tarenaya hassleriana HOM05D005634 ORTHO05D006926 2.1e-13 80.1 65 61.5
MD07G1296000 Malus domestica HOM05D005634 ORTHO05D006926 3.6e-13 79.3 78 50.0
Potri.015G008000 Populus trichocarpa HOM05D005634 ORTHO05D006926 4.8e-13 79.0 83 50.6
Lj3A901T75 Lonicera japonica HOM05D005634 ORTHO05D006926 6.2e-13 78.6 49 77.6
MBI12_g30967_MAGBIO Magnolia biondii HOM05D005634 ORTHO05D006926 8.1e-13 78.2 48 77.1
Sc25g0000970 Simmondsia chinensis HOM05D005634 ORTHO05D006926 8.1e-13 78.2 95 45.3
Haze_00263 Corylus avellana HOM05D005634 ORTHO05D006926 1.4e-12 77.4 49 75.5
Gohir.A08G102100 Gossypium hirsutum HOM05D005634 ORTHO05D006926 1.4e-12 77.4 57 66.7
Gohir.D08G113300 Gossypium hirsutum HOM05D005634 ORTHO05D006926 1.4e-12 77.4 57 66.7
Gorai.004G122200 Gossypium raimondii HOM05D005634 ORTHO05D006926 1.4e-12 77.4 57 66.7
TAR629G3370 Trochodendron aralioides HOM05D005634 ORTHO05D006926 1.4e-12 77.4 111 41.4
Migut.F00174 Erythranthe guttata HOM05D005634 ORTHO05D006926 1.8e-12 77.0 57 66.7
Hma1.2p1_0512F.1_g169290 Hydrangea macrophylla HOM05D005634 ORTHO05D006926 1.8e-12 77.0 57 70.2
Sabra15G0006100 Salix brachista HOM05D005634 ORTHO05D006926 1.8e-12 77.0 49 73.5
SalBow4G1390 Salvia bowleyana HOM05D005634 ORTHO05D006926 1.8e-12 77.0 57 64.9
CSS0047779 Camellia sinensis var. sinensis HOM05D005634 ORTHO05D006926 2.4e-12 76.6 48 75.0
Ciclev10021946m.g Citrus clementina HOM05D005634 ORTHO05D006926 2.4e-12 76.6 48 75.0
Manes.01G037500 Manihot esculenta HOM05D005634 ORTHO05D006926 2.4e-12 76.6 48 75.0
arahy.Tifrunner.gnm1.ann1.P45MK1 Arachis hypogaea HOM05D005634 ORTHO05D006926 3.1e-12 76.3 48 75.0
Atru.chr12.2317 Acer truncatum HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
Actinidia18672 Actinidia chinensis HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
arahy.Tifrunner.gnm1.ann1.WWF9U9 Arachis hypogaea HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
CANSAT21G2451 Cannabis sativa HOM05D005634 ORTHO05D006926 4.0e-12 75.9 57 66.7
CiPaw.05G201100 Carya illinoinensis HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
Lj1g0021546 Lotus japonicus HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
Oeu037042.1 Olea europaea HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
QL09p007605 Quercus lobata HOM05D005634 ORTHO05D006926 4.0e-12 75.9 48 75.0
Sed0004447 Sechium edule HOM05D005634 ORTHO05D006926 4.0e-12 75.9 47 76.6
Cpa.g.sc3.123 Carica papaya HOM05D005634 ORTHO05D006926 5.3e-12 75.5 48 77.1
Ca_16737_v3 Cicer arietinum L. HOM05D005634 ORTHO05D006926 5.3e-12 75.5 48 75.0
Duzib084G0100 Durio zibethinus HOM05D005634 ORTHO05D006926 5.3e-12 75.5 48 75.0
Eucgr.K00410 Eucalyptus grandis HOM05D005634 ORTHO05D006926 5.3e-12 75.5 48 75.0
Glyma.04G232400 Glycine max HOM05D005634 ORTHO05D006926 5.3e-12 75.5 48 75.0
Zm00001eb319210 Zea mays HOM05D005634 ORTHO05D006926 5.3e-12 75.5 48 75.0
CDE09G0596 Ceratophyllum demersum HOM05D005634 ORTHO05D006926 6.9e-12 75.1 48 75.0
CDE11G0057 Ceratophyllum demersum HOM05D005634 ORTHO05D006926 6.9e-12 75.1 48 75.0
ECA233G0867 Erigeron canadensis HOM05D005634 ORTHO05D006926 6.9e-12 75.1 48 72.9
PGR142G2679 Punica granatum HOM05D005634 ORTHO05D006926 6.9e-12 75.1 48 72.9
Thecc.03G204700 Theobroma cacao HOM05D005634 ORTHO05D006926 6.9e-12 75.1 48 72.9
vmacro10142 Vaccinium macrocarpon HOM05D005634 ORTHO05D006926 6.9e-12 75.1 47 74.5
Aqoxy5G04258 Aquilegia oxysepala HOM05D005634 ORTHO05D006926 9.0e-12 74.7 48 72.9
Nn1g00367 Nelumbo nucifera HOM05D005634 ORTHO05D006926 9.0e-12 74.7 48 75.0
SGA_v2.0_scaffold18G08443 Striga asiatica HOM05D002361 ORTHO05D006926 9.0e-12 74.7 48 72.9
GSVIVG01038606001 Vitis vinifera HOM05D005634 ORTHO05D006926 9.0e-12 74.7 48 72.9
MELO3C019382.2 Cucumis melo HOM05D005634 ORTHO05D006926 1.2e-11 74.3 47 74.5
CsaV3_3G019650 Cucumis sativus L. HOM05D005634 ORTHO05D006926 1.2e-11 74.3 47 74.5
Dinv35363 Davidia involucrata HOM05D005634 ORTHO05D006926 1.2e-11 74.3 50 68.0
Oeu061008.1 Olea europaea HOM05D005634 ORTHO05D006926 1.2e-11 74.3 48 72.9
COL.COLO4_16824 Corchorus olitorius HOM05D005634 ORTHO05D006926 1.5e-11 73.9 57 64.9
Phvul.009G048400 Phaseolus vulgaris HOM05D005634 ORTHO05D006926 1.5e-11 73.9 48 72.9
Potri.012G020700 Populus trichocarpa HOM05D005634 ORTHO05D006926 1.5e-11 73.9 57 63.2
TWI39G0994 Tripterygium wilfordii HOM05D005634 ORTHO05D006926 1.5e-11 73.9 48 72.9
Dinv29241 Davidia involucrata HOM05D005634 ORTHO05D006926 2.0e-11 73.6 47 74.5
Glyma.14G118100 Glycine max HOM05D005634 ORTHO05D006926 2.0e-11 73.6 48 70.8
HanXRQChr06g0175631 Helianthus annuus HOM05D005634 ORTHO05D006926 2.0e-11 73.6 47 72.3
Medtr3g092040 Medicago truncatula HOM05D005634 ORTHO05D006926 2.0e-11 73.6 47 74.5
Prupe.2G315600 Prunus persica HOM05D005634 ORTHO05D006926 2.0e-11 73.6 69 52.2
VMungo1309G1289 Vigna mungo HOM05D005634 ORTHO05D006926 2.0e-11 73.6 48 72.9
Glyma.06G132600 Glycine max HOM05D005634 ORTHO05D006926 2.6e-11 73.2 48 72.9
Lalb_Chr11g0067121 Lupinus albus HOM05D005634 ORTHO05D006926 2.6e-11 73.2 48 75.0
Psat5g074680 Pisum sativum HOM05D005634 ORTHO05D006926 2.6e-11 73.2 57 63.2
RcHm_v2.0_Chr1g0381981 Rosa chinensis HOM05D005634 ORTHO05D006926 2.6e-11 73.2 57 63.2
Cfa016192 Carpinus fangiana HOM05D005634 ORTHO05D006926 3.4e-11 72.8 47 72.3
Cc02_g01130 Coffea canephora HOM05D005634 ORTHO05D006926 3.4e-11 72.8 48 72.9
DCAR_014553 Daucus carota HOM05D005634 ORTHO05D006926 3.4e-11 72.8 47 70.2
Lsat_1_v5_gn_8_5560 Lactuca sativa HOM05D005634 ORTHO05D006926 3.4e-11 72.8 47 74.5
TPR.G33661 Trifolium pratense HOM05D005634 ORTHO05D006926 3.4e-11 72.8 48 72.9
AUR62035571 Chenopodium quinoa HOM05D005634 ORTHO05D006926 4.5e-11 72.4 47 70.2
Sabra05G0139500 Salix brachista HOM05D005634 ORTHO05D006926 4.5e-11 72.4 100 44.0
Sabra12G0012500 Salix brachista HOM05D005634 ORTHO05D006926 4.5e-11 72.4 58 60.3
Peaxi162Scf00618g00219 Petunia axillaris HOM05D005634 ORTHO05D006926 7.6e-11 71.6 48 70.8
ATR0620G015 Amborella trichopoda HOM05D005634 ORTHO05D006926 9.9e-11 71.2 48 70.8
EL10Ac3g05237 Beta vulgaris HOM05D005634 ORTHO05D006926 9.9e-11 71.2 47 68.1
Nitab4.5_0000015g0180 Nicotiana tabacum HOM05D005634 ORTHO05D006926 1.3e-10 70.9 48 70.8
Os09g0530000 Oryza sativa ssp. japonica HOM05D005634 ORTHO05D006926 1.3e-10 70.9 48 70.8
PGSC0003DMG400005464 Solanum tuberosum HOM05D005634 ORTHO05D006926 1.3e-10 70.9 48 70.8
unitig_0.g1985 Utricularia gibba HOM05D005634 ORTHO05D006926 1.3e-10 70.9 47 68.1
FAN10G1744 Fragaria x ananassa HOM05D005634 ORTHO05D006926 2.2e-10 70.1 48 68.8
Rhsim09G0207900 Rhododendron simsii HOM05D005634 ORTHO05D006926 2.2e-10 70.1 63 58.7
CAN.G414.9 Capsicum annuum HOM05D005634 ORTHO05D006926 2.9e-10 69.7 48 70.8
FvH4_7g32420 Fragaria vesca HOM05D005634 ORTHO05D006926 2.9e-10 69.7 57 59.6
FAN01G0994 Fragaria x ananassa HOM05D005634 ORTHO05D006926 2.9e-10 69.7 57 59.6
FAN03G3354 Fragaria x ananassa HOM05D005634 ORTHO05D006926 2.9e-10 69.7 57 59.6
Solyc06g053140.3 Solanum lycopersicum HOM05D005634 ORTHO05D006926 4.9e-10 68.9 48 68.8
Sopen06g018200 Solanum pennellii HOM05D005634 ORTHO05D006926 4.9e-10 68.9 48 68.8
MSTRG.27003 Avicennia marina HOM05D005634 ORTHO05D006926 6.4e-10 68.6 48 66.7
Nitab4.5_0001829g0010 Nicotiana tabacum HOM05D005634 ORTHO05D006926 6.4e-10 68.6 48 68.8
PSO782G0763 Papaver somniferum HOM05D005634 ORTHO05D006926 8.4e-10 68.2 118 37.3
Lalb_Chr08g0239991 Lupinus albus HOM05D005634 ORTHO05D006926 1.1e-09 67.8 48 66.7
Ah.07g205160 Amaranthus hybridus HOM05D005634 ORTHO05D006926 1.4e-09 67.4 46 67.4
AUR62006058 Chenopodium quinoa HOM05D005634 ORTHO05D006926 1.4e-09 67.4 47 63.8
ClCG05G009130 Citrullus lanatus HOM05D005634 ORTHO05D006926 1.2e-08 64.3 56 60.7
SEGI_37163 Sequoiadendron giganteum HOM05D005634 ORTHO05D006926 6.0e-08 62.0 47 59.6
VMungo1215G1823 Vigna mungo HOM05D001256 ORTHO05D001141 8.7e-07 58.2 43 62.8
Sp7g25680 Schrenkiella parvula HOM05D005634 ORTHO05D006926 1.1e-06 57.8 35 80.0
Atru.chr2.2474 Acer truncatum HOM05D000280 ORTHO05D000632 4.3e-06 55.8 43 60.5
Sed0026565 Sechium edule HOM05D000280 ORTHO05D000632 9.6e-06 54.7 43 58.1


User provided reference genes

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