Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 5.9e-267 923.7 487 100.0
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 1.2e-259 899.4 480 99.2
C06p03870 Brassica napus HOM05D015039 ORTHO05D000276 8.3e-229 797.0 429 98.1
BcaC08g43114 Brassica carinata HOM05D015039 ORTHO05D011322 5.4e-228 794.3 427 98.1
A08p33950 Brassica napus HOM05D015039 ORTHO05D011322 1.1e-175 620.5 367 88.0
BcaC05g30090 Brassica carinata HOM05D015039 ORTHO05D011322 6.9e-175 617.8 424 84.0
BcaC02g10267 Brassica carinata HOM05D015039 ORTHO05D011322 9.3e-172 607.4 321 99.4
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 1.4e-127 460.7 302 84.1
A05p43920 Brassica napus HOM05D015039 ORTHO05D011322 1.6e-70 271.2 158 86.7
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 1.8e-50 204.5 174 66.7
BNapus_Darmor_BZH_scaffold_38p02020 Brassica napus HOM05D008872 ORTHO05D011322 3.1e-50 203.8 225 58.2
BolC2t06990H Brassica oleracea HOM05D008872 ORTHO05D011322 3.1e-50 203.8 225 58.2
A03p13580 Brassica napus HOM05D012600 ORTHO05D039409 3.8e-48 196.8 388 44.3
C08p52410 Brassica napus HOM05D008872 ORTHO05D011322 3.6e-46 190.3 213 54.0
BolC7t43612H Brassica oleracea HOM05D008872 ORTHO05D011322 4.3e-44 183.3 213 52.6
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 2.2e-40 171.0 230 49.6
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 1.6e-38 164.9 162 58.0
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 2.7e-38 164.1 167 60.5
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 6.1e-38 162.9 193 51.8
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 3.0e-37 160.6 193 51.3
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 5.1e-37 159.8 172 55.8
BcaC06g34166 Brassica carinata HOM05D008872 ORTHO05D039385 1.3e-35 155.2 207 48.3
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 1.3e-35 155.2 176 53.4
C06p02220 Brassica napus HOM05D008872 ORTHO05D011322 4.8e-35 153.3 233 44.2
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 6.3e-35 152.9 193 50.8
C05p01530 Brassica napus HOM05D008872 ORTHO05D011322 2.0e-33 147.9 161 57.8
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 6.3e-27 126.3 148 54.1
BcaC01g05406 Brassica carinata HOM05D008872 ORTHO05D011322 1.4e-26 125.2 163 47.2
BcaC03g17687 Brassica carinata HOM05D034399 ORTHO05D031762 2.6e-25 120.9 183 46.4
C02p56960 Brassica napus HOM05D034399 ORTHO05D031762 2.6e-25 120.9 183 46.4
BolC2t11764H Brassica oleracea HOM05D034399 ORTHO05D031762 2.6e-25 120.9 183 46.4
C02p56950 Brassica napus HOM05D008872 ORTHO05D011322 3.5e-25 120.6 100 68.0
C03p18040 Brassica napus HOM05D008872 ORTHO05D011322 7.7e-25 119.4 106 65.1
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 1.1e-23 115.5 89 70.8
C09p54490 Brassica napus HOM05D008872 ORTHO05D011322 1.2e-22 112.1 101 64.4
C04p02470 Brassica napus HOM05D008872 ORTHO05D011322 4.4e-20 103.6 103 55.3
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 7.2e-15 86.3 123 46.3
BcaC05g29762 Brassica carinata HOM05D009579 ORTHO05D092626 2.0e-12 78.2 188 36.2
BraA09t38766Z Brassica rapa HOM05D012600 ORTHO05D024069 2.0e-12 78.2 80 60.0
BcaC02g09063 Brassica carinata HOM05D009579 ORTHO05D014125 3.4e-12 77.4 204 34.8
BolC4t25373H Brassica oleracea HOM05D009579 ORTHO05D014125 3.4e-12 77.4 204 34.8
BcaB03g16517 Brassica carinata HOM05D009579 ORTHO05D014125 5.7e-12 76.6 204 35.3
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 1.3e-11 75.5 150 41.3
BolC3t13168H Brassica oleracea HOM05D012600 ORTHO05D024069 6.3e-11 73.2 74 60.8
A09p32210 Brassica napus HOM05D012600 ORTHO05D024069 8.3e-11 72.8 74 60.8
BcaC07g40975 Brassica carinata HOM05D009579 ORTHO05D014125 1.8e-10 71.6 187 34.8
BcaC08g46330 Brassica carinata HOM05D012600 ORTHO05D039409 3.1e-10 70.9 81 58.0
BolC3t12905H Brassica oleracea HOM05D009579 ORTHO05D014125 1.2e-09 68.9 197 34.5
A08p01540 Brassica napus HOM05D009579 ORTHO05D014125 3.5e-09 67.4 197 34.0
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 3.8e-08 63.9 53 66.0
C07p31980 Brassica napus HOM05D008872 ORTHO05D039385 4.2e-07 60.5 100 37.0
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 1.6e-06 58.5 108 38.9
BcaC08g44779 Brassica carinata HOM05D008872 ORTHO05D032631 2.8e-06 57.8 88 45.5
C02p11010 Brassica napus HOM05D009579 ORTHO05D019922 3.6e-06 57.4 212 31.6
C04p37990 Brassica napus HOM05D009579 ORTHO05D014125 3.6e-06 57.4 146 33.6
BolC6t37523H Brassica oleracea HOM05D008872 ORTHO05D032631 3.6e-06 57.4 88 45.5
BolC7t41296H Brassica oleracea HOM05D009579 ORTHO05D021934 3.6e-06 57.4 132 34.8


User provided reference genes

Program Settings