Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p80190 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-104 381.3 187 100.0
BolC3t20273H Brassica oleracea HOM05D000353 ORTHO05D000174 1.0e-102 376.7 188 99.5
C06p06510 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-88 330.1 184 90.2
C05p39920 Brassica napus HOM05D000353 ORTHO05D000174 3.0e-86 322.0 181 89.0
BolC5t32737H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-86 322.0 181 89.0
BolC6t35763H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-84 316.2 184 87.5
C02p45010 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-83 312.4 183 86.9
C09p33140 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-81 306.2 179 85.5
BolC9t56148H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-79 300.1 175 85.7
BolC2t08763H Brassica oleracea HOM05D000353 ORTHO05D000174 4.2e-72 275.0 164 82.9
C02p49210 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-57 225.7 134 85.8
C05p15290 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-57 225.3 142 79.6
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 7.5e-53 211.1 212 53.8
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-52 209.5 211 53.6
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-51 206.5 209 51.7
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-51 204.9 212 51.9
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 9.1e-51 204.1 212 51.4
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 7.7e-50 201.1 212 50.5
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 7.7e-50 201.1 212 50.5
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.0e-49 200.7 212 50.5
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-49 199.1 210 50.5
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-49 199.1 212 50.5
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-49 199.1 212 50.5
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 2.9e-49 199.1 212 50.5
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 3.8e-49 198.7 212 50.0
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 5.0e-49 198.4 211 49.8
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-48 197.2 212 50.0
A09p37000 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-48 196.4 215 49.8
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-48 196.4 212 49.5
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 5.5e-48 194.9 215 49.3
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 9.4e-48 194.1 215 49.3
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-45 186.4 200 51.0
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-44 183.7 204 48.5
C04p61970 Brassica napus HOM05D000353 ORTHO05D000174 8.3e-44 181.0 114 82.5
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 4.5e-42 175.3 203 47.8
C05p53400 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-41 171.8 200 48.5
C05p27810 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-40 170.2 98 87.8
BolC5t31503H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-40 170.2 98 87.8
A02p24410 Brassica napus HOM05D000353 ORTHO05D000174 9.5e-40 167.5 177 48.6
BraA02t07430Z Brassica rapa HOM05D000353 ORTHO05D000174 9.5e-40 167.5 177 48.6
BolC2t10535H Brassica oleracea HOM05D000353 ORTHO05D000174 6.1e-39 164.9 98 85.7
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 8.0e-39 164.5 176 50.6
C02p05930 Brassica napus HOM05D000353 ORTHO05D000174 8.0e-39 164.5 95 84.2
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-37 160.6 181 47.5
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 1.2e-37 160.6 181 47.5
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 3.4e-37 159.1 176 46.6
BolC1t04988H Brassica oleracea HOM05D000353 ORTHO05D042036 1.7e-36 156.8 112 75.0
BcaC01g00467 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-36 156.0 73 98.6
C01p50340 Brassica napus HOM05D000353 ORTHO05D042036 2.4e-35 152.9 112 74.1
BcaB04g17265 Brassica carinata HOM05D000353 ORTHO05D000174 5.4e-35 151.8 167 52.7
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 5.4e-35 151.8 167 52.7
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-35 151.8 182 46.2
A09p27800 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-34 147.9 167 48.5
BraA09t38350Z Brassica rapa HOM05D000353 ORTHO05D000174 7.8e-34 147.9 167 48.5
BcaC04g21324 Brassica carinata HOM05D000353 ORTHO05D000174 3.3e-32 142.5 73 91.8
BcaC08g43304 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-32 141.7 73 91.8
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-31 139.8 152 52.0
BcaB08g35053 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-31 139.4 127 57.5
BcaC03g17014 Brassica carinata HOM05D000353 ORTHO05D000174 4.7e-31 138.7 74 87.8
BcaB04g18330 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-30 137.1 165 46.7
BcaB02g06410 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-30 136.3 165 46.1
BcaB02g11004 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-29 132.9 165 44.8
C05p50200 Brassica napus HOM05D009426 ORTHO05D000174 1.1e-27 127.5 93 69.9
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-26 122.9 175 42.3
BolC5t34009H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-25 119.4 109 55.0
BolC9t57771H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-24 117.5 160 39.4
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-24 117.1 204 39.2
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 4.3e-24 115.5 217 37.8
C02p47680 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-23 114.0 109 56.9
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-23 112.8 147 43.5
C04p61960 Brassica napus HOM05D000353 ORTHO05D000174 6.8e-22 108.2 58 87.9
BolC1t03173H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-21 107.1 185 37.8
A05p21760 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-21 105.5 176 36.4
BraA05t21097Z Brassica rapa HOM05D000353 ORTHO05D000174 4.4e-21 105.5 176 36.4
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-20 103.6 148 39.2
BolC3t19258H Brassica oleracea HOM05D000353 ORTHO05D000174 1.7e-20 103.6 97 56.7
C03p69980 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-20 102.1 64 71.9
BcaB03g15976 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-19 100.9 64 65.6
BcaB03g15253 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-19 100.5 64 68.8
BcaB03g14941 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-19 99.8 63 68.3
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.1e-19 99.0 204 28.9
BcaB04g18043 Brassica carinata HOM05D000353 ORTHO05D000174 4.1e-19 99.0 64 67.2
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 5.4e-19 98.6 204 28.4
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.2e-19 97.8 204 28.4
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.2e-19 97.8 204 28.4
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.2e-19 97.8 204 28.4
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.2e-19 97.8 204 28.4
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.2e-19 97.8 204 28.4
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.2e-19 97.8 204 28.4
BcaC03g17013 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-18 97.4 57 78.9
BcaC07g36976 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-17 93.2 105 43.8
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.0e-17 92.8 204 27.9
C08p00750 Brassica napus HOM05D005116 ORTHO05D031782 6.6e-17 91.7 97 47.4
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 8.6e-17 91.3 219 30.6
BcaB05g23882 Brassica carinata HOM05D000353 ORTHO05D010037 3.3e-16 89.4 202 29.7
BcaC05g27207 Brassica carinata HOM05D000353 ORTHO05D000174 4.3e-16 89.0 61 63.9
BraA06t25279Z Brassica rapa HOM05D000353 ORTHO05D000174 4.3e-16 89.0 52 75.0
BcaB08g34639 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-16 88.6 58 70.7
BraSC36t46096Z Brassica rapa HOM05D000353 ORTHO05D041597 9.5e-16 87.8 54 77.8
BolC9t55253H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-15 86.7 92 51.1
A10p07220 Brassica napus HOM05D000353 ORTHO05D041597 2.8e-15 86.3 54 75.9
BolC8t48495H Brassica oleracea HOM05D000353 ORTHO05D000174 3.6e-15 85.9 93 49.5
BcaNung06211 Brassica carinata HOM05D000353 ORTHO05D000174 4.7e-15 85.5 58 65.5
BolC9t54833H Brassica oleracea HOM05D000096 ORTHO05D000045 6.2e-15 85.1 52 71.2
BcaC08g43681 Brassica carinata HOM05D000353 ORTHO05D000174 8.1e-15 84.7 49 75.5
BraA02t07157Z Brassica rapa HOM05D000353 ORTHO05D000174 8.1e-15 84.7 110 45.5
BcaC03g14334 Brassica carinata HOM05D000353 ORTHO05D000174 2.3e-14 83.2 210 27.6
BolC6t36183H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-14 83.2 49 73.5
BolC8t47319H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-14 82.8 58 62.1
A03p50200 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-14 82.4 58 65.5
BcaC03g14899 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-13 80.5 49 71.4
BolC2t10629H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-13 80.5 49 71.4
A06p13610 Brassica napus HOM05D000353 ORTHO05D000174 9.9e-13 77.8 86 48.8
BolC5t31838H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-12 77.4 46 76.1
BraA09t37616Z Brassica rapa HOM05D000353 ORTHO05D000174 4.9e-12 75.5 126 31.7
BcaB02g11005 Brassica carinata HOM05D000096 ORTHO05D010037 1.9e-11 73.6 46 73.9
BcaB03g15975 Brassica carinata HOM05D000096 ORTHO05D010037 1.9e-11 73.6 46 73.9
BcaB02g06411 Brassica carinata HOM05D000096 ORTHO05D010037 4.1e-11 72.4 44 75.0
C07p19130 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-11 72.0 46 73.9
Thhalv10027242m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.4e-11 72.0 219 27.4
BolC7t42423H Brassica oleracea HOM05D000353 ORTHO05D000174 7.1e-11 71.6 46 71.7
BraA06t25441Z Brassica rapa HOM05D000353 ORTHO05D000174 7.1e-11 71.6 126 30.2
Thhalv10002212m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.7e-10 69.7 159 29.6
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 7.8e-10 68.2 166 25.3
Carub.0004s0702 Capsella rubella HOM05D000353 ORTHO05D000174 7.8e-10 68.2 208 24.0
Carub.0016s0007 Capsella rubella HOM05D000353 ORTHO05D000174 7.8e-10 68.2 208 23.1
BraA09t38736Z Brassica rapa HOM05D000353 ORTHO05D018805 3.9e-09 65.9 35 85.7
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.9e-09 65.9 223 26.0
C06p03720 Brassica napus HOM05D000353 ORTHO05D018805 5.1e-09 65.5 32 90.6
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 6.6e-09 65.1 63 39.7
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 1.9e-08 63.5 165 26.1
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.5e-08 63.2 205 25.9
C07p07970 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-08 62.8 204 25.0
BolC7t41214H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-08 62.8 204 25.0
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.3e-08 62.8 129 28.7
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 4.3e-08 62.4 209 23.4
Carub.0076s0001 Capsella rubella HOM05D000353 ORTHO05D000174 4.3e-08 62.4 219 22.4
Thhalv10029157m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.6e-08 61.2 113 30.1
A06p35790 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-07 60.5 62 41.9
C04p41240 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-07 60.5 62 41.9
Carub.0001s3398 Capsella rubella HOM05D000353 ORTHO05D000174 1.6e-07 60.5 206 22.8
A09p22040 Brassica napus HOM05D000353 ORTHO05D018805 2.1e-07 60.1 32 84.4
BolC8t46849H Brassica oleracea HOM05D000353 ORTHO05D018805 2.1e-07 60.1 69 47.8
Carub.0006s2622 Capsella rubella HOM05D000353 ORTHO05D000174 2.1e-07 60.1 208 22.1
Carub.0012s0011 Capsella rubella HOM05D000353 ORTHO05D000174 2.8e-07 59.7 163 24.5
C03p52500 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-07 59.3 60 36.7
Thhalv10029208m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.6e-07 59.3 162 29.0
BraSC35t45967Z Brassica rapa HOM05D000353 ORTHO05D018805 1.4e-06 57.4 32 78.1
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.4e-06 57.4 130 27.7
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 5.2e-06 55.5 29 82.8
C09p62600 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-06 54.7 103 40.8


User provided reference genes

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