Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p80010 Brassica napus HOM05D010185 ORTHO05D016098 6.1e-67 257.3 125 100.0
A09p12700 Brassica napus HOM05D011474 ORTHO05D016098 5.5e-44 181.0 122 75.4
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 5.5e-44 181.0 122 75.4
BolC3t20253H Brassica oleracea HOM05D010185 ORTHO05D016098 6.3e-40 167.5 84 95.2
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 1.0e-21 107.1 94 54.3
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 1.3e-21 106.7 94 54.3
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-21 106.7 101 50.5
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-21 104.0 125 47.2
BraA02t07715Z Brassica rapa HOM05D010185 ORTHO05D016098 8.6e-21 104.0 99 55.6
BcaB08g34738 Brassica carinata HOM05D010185 ORTHO05D016098 1.9e-20 102.8 108 52.8
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-20 102.1 94 55.3
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-20 101.7 111 50.5
A02p27000 Brassica napus HOM05D009214 ORTHO05D016098 9.5e-20 100.5 99 54.5
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-19 100.1 99 55.6
BolC5t29151H Brassica oleracea HOM05D000496 ORTHO05D016098 1.6e-19 99.8 103 52.4
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 2.3e-18 95.9 94 53.2
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 1.6e-14 83.2 109 44.0
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 4.6e-14 81.6 112 42.9
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 3.9e-13 78.6 75 50.7
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 6.6e-13 77.8 95 38.9
BraA04t15790Z Brassica rapa HOM05D009214 ORTHO05D027438 1.1e-12 77.0 129 41.9
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-12 74.7 75 44.0
BraA06t26209Z Brassica rapa HOM05D010185 ORTHO05D015459 2.1e-11 72.8 75 46.7
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-11 72.0 116 36.2
A04p11750 Brassica napus HOM05D009214 ORTHO05D024265 4.7e-11 71.6 75 49.3
BraA08t32635Z Brassica rapa HOM05D010185 ORTHO05D015459 6.2e-11 71.2 75 45.3
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 8.1e-11 70.9 113 34.5
BolC5t34388H Brassica oleracea HOM05D009214 ORTHO05D000411 1.1e-10 70.5 74 50.0
C05p16970 Brassica napus HOM05D009214 ORTHO05D024265 1.4e-10 70.1 75 49.3
BolC9t57308H Brassica oleracea HOM05D010185 ORTHO05D015459 1.8e-10 69.7 75 44.0
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 2.3e-10 69.3 131 35.1
BolC7t43207H Brassica oleracea HOM05D000496 ORTHO05D000411 2.3e-10 69.3 143 37.8
BcaC04g20372 Brassica carinata HOM05D010185 ORTHO05D015459 3.1e-10 68.9 75 42.7
A01p35560 Brassica napus HOM05D010185 ORTHO05D015459 3.1e-10 68.9 108 38.0
A06p43710 Brassica napus HOM05D000496 ORTHO05D000411 3.1e-10 68.9 125 36.8
BcaB02g10743 Brassica carinata HOM05D010185 ORTHO05D000006 4.0e-10 68.6 113 41.6
BolC5t31358H Brassica oleracea HOM05D010185 ORTHO05D015459 4.0e-10 68.6 89 38.2
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 5.2e-10 68.2 108 38.9
C03p32630 Brassica napus HOM05D000496 ORTHO05D000411 6.8e-10 67.8 87 43.7
BraA07t28028Z Brassica rapa HOM05D010185 ORTHO05D015459 6.8e-10 67.8 120 37.5
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 8.9e-10 67.4 118 33.9
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-10 67.4 124 33.1
C05p04150 Brassica napus HOM05D000496 ORTHO05D000411 8.9e-10 67.4 92 40.2
C06p28390 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-09 67.0 75 45.3
BolC4t25083H Brassica oleracea HOM05D009214 ORTHO05D024265 1.2e-09 67.0 74 48.6
BcaB08g35380 Brassica carinata HOM05D009521 ORTHO05D027438 2.0e-09 66.2 116 33.6
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-09 66.2 124 41.1
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.6e-09 65.9 119 35.3
A03p57130 Brassica napus HOM05D009214 ORTHO05D000411 3.4e-09 65.5 100 38.0
BolC9t57397H Brassica oleracea HOM05D009214 ORTHO05D013521 3.4e-09 65.5 87 42.5
BraA01t04229Z Brassica rapa HOM05D000003 ORTHO05D000006 3.4e-09 65.5 86 41.9
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-09 65.1 75 44.0
C03p90150 Brassica napus HOM05D009521 ORTHO05D000411 4.4e-09 65.1 132 34.1
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 5.8e-09 64.7 127 34.6
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 7.5e-09 64.3 120 35.8
BcaB02g11325 Brassica carinata HOM05D009214 ORTHO05D013521 9.9e-09 63.9 124 36.3
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 1.3e-08 63.5 106 35.8
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 1.3e-08 63.5 120 32.5
A04p28190 Brassica napus HOM05D010185 ORTHO05D016098 1.3e-08 63.5 75 37.3
A05p25540 Brassica napus HOM05D009214 ORTHO05D013521 1.3e-08 63.5 130 34.6
C07p06470 Brassica napus HOM05D010185 ORTHO05D015459 1.3e-08 63.5 106 35.8
BolC5t34093H Brassica oleracea HOM05D010185 ORTHO05D000411 1.3e-08 63.5 73 43.8
C02p20270 Brassica napus HOM05D009214 ORTHO05D000411 1.7e-08 63.2 125 35.2
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 2.2e-08 62.8 118 32.2
BcaC03g17398 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-08 62.8 75 44.0
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-08 62.8 119 31.1
A02p15120 Brassica napus HOM05D009214 ORTHO05D013521 2.9e-08 62.4 125 34.4
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 2.9e-08 62.4 85 35.3
BolC3t21595H Brassica oleracea HOM05D000496 ORTHO05D000411 2.9e-08 62.4 119 39.5
BolC5t33965H Brassica oleracea HOM05D010764 ORTHO05D016724 2.9e-08 62.4 123 38.2
BolC9t59648H Brassica oleracea HOM05D000759 ORTHO05D000574 3.7e-08 62.0 75 44.0
BcaC01g00333 Brassica carinata HOM05D010764 ORTHO05D003091 4.9e-08 61.6 75 41.3
BolC9t58221H Brassica oleracea HOM05D009214 ORTHO05D013521 4.9e-08 61.6 75 40.0
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 6.4e-08 61.2 91 39.6
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 6.4e-08 61.2 75 41.3
A03p15520 Brassica napus HOM05D010185 ORTHO05D015459 6.4e-08 61.2 115 35.7
C02p51670 Brassica napus HOM05D009214 ORTHO05D000411 6.4e-08 61.2 131 36.6
C06p05580 Brassica napus HOM05D009214 ORTHO05D013521 6.4e-08 61.2 99 40.4
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 6.4e-08 61.2 119 38.7
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-08 60.8 117 33.3
BcaC03g17105 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-08 60.8 115 33.0
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 60.5 128 34.4
C02p52220 Brassica napus HOM05D009214 ORTHO05D013521 1.1e-07 60.5 112 35.7
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 1.1e-07 60.5 75 38.7
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 1.4e-07 60.1 113 39.8
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-07 60.1 120 37.5
BolC7t45625H Brassica oleracea HOM05D010764 ORTHO05D016724 1.4e-07 60.1 73 42.5
BolC8t46808H Brassica oleracea HOM05D010185 ORTHO05D000411 1.4e-07 60.1 116 34.5
BcaB01g00821 Brassica carinata HOM05D010185 ORTHO05D015459 1.9e-07 59.7 136 33.1
BcaC03g17805 Brassica carinata HOM05D009214 ORTHO05D013521 2.4e-07 59.3 127 33.1
BolC6t35665H Brassica oleracea HOM05D009214 ORTHO05D013521 2.4e-07 59.3 99 39.4
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-07 58.9 118 30.5
BolC2t06006H Brassica oleracea HOM05D010185 ORTHO05D027115 3.2e-07 58.9 125 36.0
BolC8t47004H Brassica oleracea HOM05D009521 ORTHO05D013247 7.1e-07 57.8 75 38.7
BolC2t11019H Brassica oleracea HOM05D009214 ORTHO05D013521 9.2e-07 57.4 124 32.3
BolC7t42162H Brassica oleracea HOM05D009214 ORTHO05D013521 1.2e-06 57.0 75 37.3
BolC7t42883H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-06 57.0 123 34.1
BolC7t44560H Brassica oleracea HOM05D000496 ORTHO05D000411 1.6e-06 56.6 96 35.4
BcaC07g37122 Brassica carinata HOM05D009214 ORTHO05D027576 3.5e-06 55.5 118 33.1
BolC6t35884H Brassica oleracea HOM05D000496 ORTHO05D013247 6.0e-06 54.7 102 34.3
BcaB02g10222 Brassica carinata HOM05D000106 ORTHO05D000160 7.8e-06 54.3 105 38.1
BcaB05g24571 Brassica carinata HOM05D000003 ORTHO05D000006 7.8e-06 54.3 123 34.1
C02p47150 Brassica napus HOM05D010764 ORTHO05D016724 7.8e-06 54.3 114 33.3


User provided reference genes

Program Settings