Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p79890 Brassica napus HOM05D000003 ORTHO05D000283 1.9e-65 252.3 123 100.0
BolC3t20242H Brassica oleracea HOM05D000003 ORTHO05D011072 2.4e-60 235.3 123 94.3
BolC5t32160H Brassica oleracea HOM05D000003 ORTHO05D000283 1.6e-32 142.9 91 76.9
BolC2t07353H Brassica oleracea HOM05D000003 ORTHO05D000283 5.5e-28 127.9 91 65.9
BraA09t37875Z Brassica rapa HOM05D000003 ORTHO05D000004 4.1e-23 111.7 91 52.7
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-22 108.2 90 57.8
BolC4t28361H Brassica oleracea HOM05D000003 ORTHO05D000283 4.5e-22 108.2 90 53.3
BolC9t55722H Brassica oleracea HOM05D000003 ORTHO05D000283 4.5e-22 108.2 91 51.6
BolC1t01970H Brassica oleracea HOM05D000003 ORTHO05D000283 5.9e-22 107.8 90 55.6
BolC4t22334H Brassica oleracea HOM05D000003 ORTHO05D011072 7.6e-22 107.5 91 56.0
BolC9t54942H Brassica oleracea HOM05D000003 ORTHO05D000283 1.3e-21 106.7 91 52.7
C09p20360 Brassica napus HOM05D000003 ORTHO05D000283 3.8e-21 105.1 91 51.6
BcaC03g15593 Brassica carinata HOM05D000003 ORTHO05D000283 5.0e-21 104.8 91 51.6
BolC9t56630H Brassica oleracea HOM05D000003 ORTHO05D000283 6.5e-21 104.4 91 52.7
C07p16410 Brassica napus HOM05D000003 ORTHO05D000283 1.1e-20 103.6 91 53.8
BolC7t42137H Brassica oleracea HOM05D000003 ORTHO05D000283 1.1e-20 103.6 91 53.8
BolC9t59539H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-20 102.4 91 50.5
BraA01t02762Z Brassica rapa HOM05D000003 ORTHO05D000283 1.2e-19 100.1 91 52.7
BolC5t32500H Brassica oleracea HOM05D000003 ORTHO05D011072 4.6e-19 98.2 85 56.5
BolC7t40742H Brassica oleracea HOM05D000003 ORTHO05D000283 1.4e-15 86.7 70 55.7
BraA08t33381Z Brassica rapa HOM05D000003 ORTHO05D000283 2.4e-15 85.9 81 49.4
BolC2t09832H Brassica oleracea HOM05D000003 ORTHO05D000283 3.1e-15 85.5 84 48.8
AL5G25560 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 7.7e-14 80.9 91 42.9
Carub.0001s3394 Capsella rubella HOM05D000003 ORTHO05D000283 1.0e-13 80.5 91 45.1
BolC4t24203H Brassica oleracea HOM05D000003 ORTHO05D011072 2.2e-13 79.3 91 40.7
BolC9t56388H Brassica oleracea HOM05D000003 ORTHO05D011072 2.2e-13 79.3 90 41.1
BcaC02g11961 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-12 77.0 88 39.8
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.4e-12 76.6 88 43.2
BolC6t36801H Brassica oleracea HOM05D000003 ORTHO05D000283 1.9e-12 76.3 64 56.2
BolC6t37177H Brassica oleracea HOM05D000003 ORTHO05D000283 7.2e-12 74.3 89 34.8
BolC2t07181H Brassica oleracea HOM05D000003 ORTHO05D000283 2.7e-11 72.4 88 39.8
BcaB04g19231 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-11 72.0 100 36.0
BraA04t17013Z Brassica rapa HOM05D000003 ORTHO05D000283 3.6e-11 72.0 78 39.7
BcaC04g21145 Brassica carinata HOM05D000003 ORTHO05D000283 1.0e-10 70.5 88 36.4
BolC1t03920H Brassica oleracea HOM05D000003 ORTHO05D000283 1.0e-10 70.5 88 36.4
AL1G41870 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.3e-10 69.3 88 38.6
BcaB02g10680 Brassica carinata HOM05D000003 ORTHO05D000283 2.3e-10 69.3 44 72.7
BcaC06g36136 Brassica carinata HOM05D000003 ORTHO05D000283 2.3e-10 69.3 88 38.6
BcaC03g17941 Brassica carinata HOM05D000003 ORTHO05D000283 3.0e-10 68.9 121 34.7
C08p24180 Brassica napus HOM05D000003 ORTHO05D011072 3.0e-10 68.9 90 37.8
BolC3t18672H Brassica oleracea HOM05D000003 ORTHO05D011072 3.9e-10 68.6 93 41.9
Sp2g02500 Schrenkiella parvula HOM05D000003 ORTHO05D000283 3.9e-10 68.6 90 35.6
BolC2t07536H Brassica oleracea HOM05D000003 ORTHO05D000283 5.1e-10 68.2 100 35.0
BolC2t07267H Brassica oleracea HOM05D038963 ORTHO05D000283 6.7e-10 67.8 88 37.5
BolC5t32204H Brassica oleracea HOM05D000003 ORTHO05D000283 6.7e-10 67.8 88 37.5
C06p15790 Brassica napus HOM05D000003 ORTHO05D000283 8.8e-10 67.4 101 36.6
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-09 67.0 84 41.7
BcaB03g13757 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-09 67.0 88 35.2
BolC6t37448H Brassica oleracea HOM05D000003 ORTHO05D011072 1.1e-09 67.0 52 55.8
BcaB02g09394 Brassica carinata HOM05D000003 ORTHO05D000283 1.5e-09 66.6 88 37.5
BolC2t06054H Brassica oleracea HOM05D026567 ORTHO05D032145 1.5e-09 66.6 61 59.0
BcaB02g07795 Brassica carinata HOM05D000003 ORTHO05D000283 4.4e-09 65.1 92 34.8
BcaC09g48611 Brassica carinata HOM05D000003 ORTHO05D000283 5.7e-09 64.7 87 34.5
BcaB02g08653 Brassica carinata HOM05D000003 ORTHO05D000283 9.7e-09 63.9 88 35.2
BolC6t39459H Brassica oleracea HOM05D000003 ORTHO05D011072 9.7e-09 63.9 52 51.9
BcaC06g35549 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-08 63.5 92 30.4
BcaC09g48789 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-08 63.5 92 30.4
BcaC07g39463 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-08 62.4 119 37.8
C04p29260 Brassica napus HOM05D054850 ORTHO05D033712 2.8e-08 62.4 91 33.0
BraA02t05728Z Brassica rapa HOM05D000003 ORTHO05D000283 2.8e-08 62.4 73 38.4
BraA07t28299Z Brassica rapa HOM05D000003 ORTHO05D000283 2.8e-08 62.4 88 38.6
BcaNung03504 Brassica carinata HOM05D000003 ORTHO05D027488 3.7e-08 62.0 88 35.2
BraA01t01398Z Brassica rapa HOM05D000003 ORTHO05D000283 4.8e-08 61.6 89 34.8
A02p04600 Brassica napus HOM05D000003 ORTHO05D000283 6.3e-08 61.2 88 34.1
BolC9t54513H Brassica oleracea HOM05D000003 ORTHO05D000283 8.2e-08 60.8 89 38.2
AL6G39210 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.4e-07 59.3 92 35.9
BolC3t21561H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-07 59.3 88 38.6
BraA09t39919Z Brassica rapa HOM05D000003 ORTHO05D000283 2.4e-07 59.3 93 39.8
Nitab4.5_0001370g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.4e-07 59.3 94 33.0
BcaC07g42553 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-07 58.9 87 35.6
BcaC09g49252 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-07 58.9 88 36.4
C08p07500 Brassica napus HOM05D000003 ORTHO05D000283 3.1e-07 58.9 87 34.5
BolC1t05746H Brassica oleracea HOM05D000003 ORTHO05D000283 3.1e-07 58.9 108 35.2
BraA03t14881Z Brassica rapa HOM05D000003 ORTHO05D000283 3.1e-07 58.9 89 38.2
BraA05t21451Z Brassica rapa HOM05D000003 ORTHO05D000283 3.1e-07 58.9 90 33.3
BraA07t29238Z Brassica rapa HOM05D000003 ORTHO05D000283 3.1e-07 58.9 90 36.7
BolC9t55991H Brassica oleracea HOM05D000003 ORTHO05D000283 4.1e-07 58.5 104 36.5
BolC2t11979H Brassica oleracea HOM05D000003 ORTHO05D000283 5.3e-07 58.2 126 33.3
BolC2t12335H Brassica oleracea HOM05D000003 ORTHO05D011072 5.3e-07 58.2 52 48.1
BolC6t37029H Brassica oleracea HOM05D000003 ORTHO05D043042 5.3e-07 58.2 50 54.0
BcaC07g38507 Brassica carinata HOM05D000003 ORTHO05D000283 7.0e-07 57.8 88 35.2
BraA07t29677Z Brassica rapa HOM05D000003 ORTHO05D043042 7.0e-07 57.8 50 54.0
BolC2t09122H Brassica oleracea HOM05D000003 ORTHO05D000283 9.1e-07 57.4 94 31.9
BcaB04g17218 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-06 57.0 87 34.5
BraA07t28371Z Brassica rapa HOM05D000003 ORTHO05D000283 1.2e-06 57.0 96 32.3
C07p08580 Brassica napus HOM05D000003 ORTHO05D011072 1.5e-06 56.6 66 34.8
BcaC05g27540 Brassica carinata HOM05D012406 ORTHO05D000283 2.0e-06 56.2 35 68.6
A04p02300 Brassica napus HOM05D000003 ORTHO05D000283 2.0e-06 56.2 88 31.8
BolC3t21045H Brassica oleracea HOM05D000003 ORTHO05D000283 2.0e-06 56.2 91 38.5
BolC3t21303H Brassica oleracea HOM05D000003 ORTHO05D011072 2.0e-06 56.2 48 52.1
BcaB05g22928 Brassica carinata HOM05D000003 ORTHO05D000283 2.6e-06 55.8 91 37.4
BcaB06g29407 Brassica carinata HOM05D000003 ORTHO05D000283 2.6e-06 55.8 91 37.4
BraA05t21410Z Brassica rapa HOM05D000003 ORTHO05D000283 2.6e-06 55.8 90 33.3
BcaC02g09964 Brassica carinata HOM05D000003 ORTHO05D000283 3.4e-06 55.5 96 37.5
C09p27360 Brassica napus HOM05D000003 ORTHO05D000283 3.4e-06 55.5 88 31.8
BraA04t15908Z Brassica rapa HOM05D000003 ORTHO05D000283 3.4e-06 55.5 81 38.3
BraA09t41647Z Brassica rapa HOM05D000003 ORTHO05D000283 3.4e-06 55.5 91 37.4
BcaC01g00005 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-06 55.1 122 27.0
ECA236G2968 Erigeron canadensis HOM05D000003 ORTHO05D000283 4.5e-06 55.1 88 31.8
BcaB01g01489 Brassica carinata HOM05D000003 ORTHO05D000283 5.9e-06 54.7 69 34.8
BcaB01g06303 Brassica carinata HOM05D000003 ORTHO05D000283 5.9e-06 54.7 96 38.5
BolC6t38689H Brassica oleracea HOM05D000003 ORTHO05D000283 5.9e-06 54.7 101 30.7
BolC7t45167H Brassica oleracea HOM05D000003 ORTHO05D000283 5.9e-06 54.7 100 30.0
BraA05t22446Z Brassica rapa HOM05D000003 ORTHO05D000283 5.9e-06 54.7 88 36.4
ECA233G4961 Erigeron canadensis HOM05D000003 ORTHO05D000283 5.9e-06 54.7 88 31.8
C05p39080 Brassica napus HOM05D000003 ORTHO05D000283 7.7e-06 54.3 102 31.4
BolC5t30919H Brassica oleracea HOM05D000003 ORTHO05D011072 7.7e-06 54.3 67 38.8
BraA05t20329Z Brassica rapa HOM05D000003 ORTHO05D000004 7.7e-06 54.3 35 65.7
Carub.0005s2988 Capsella rubella HOM05D000003 ORTHO05D000283 7.7e-06 54.3 93 31.2


User provided reference genes

Program Settings